Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Gm29199-201ENSMUST00000187766 775 ntBASIC12.28□□□□□ -0.44
Hoxc4Q08624 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.28□□□□□ -0.44
Hoxc4Q08624 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.28□□□□□ -0.44
Hoxc4Q08624 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.28□□□□□ -0.44
Hoxc4Q08624 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.28□□□□□ -0.44
Hoxc4Q08624 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.28□□□□□ -0.44
Hoxc4Q08624 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.28□□□□□ -0.44
Hoxc4Q08624 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc4Q08624 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc4Q08624 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc4Q08624 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc4Q08624 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Hoxc4Q08624 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc4Q08624 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc4Q08624 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Hoxc4Q08624 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc4Q08624 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc4Q08624 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc4Q08624 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc4Q08624 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc4Q08624 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.28□□□□□ -0.44
Hoxc4Q08624 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc4Q08624 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc4Q08624 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.28□□□□□ -0.44
Hoxc4Q08624 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.28□□□□□ -0.44
Hoxc4Q08624 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Hoxc4Q08624 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.28□□□□□ -0.44
Hoxc4Q08624 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc4Q08624 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc4Q08624 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc4Q08624 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Hoxc4Q08624 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc4Q08624 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc4Q08624 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.44
Hoxc4Q08624 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc4Q08624 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.27□□□□□ -0.44
Hoxc4Q08624 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Hoxc4Q08624 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc4Q08624 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc4Q08624 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc4Q08624 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc4Q08624 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc4Q08624 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
Hoxc4Q08624 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Hoxc4Q08624 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc4Q08624 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc4Q08624 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc4Q08624 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Hoxc4Q08624 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc4Q08624 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc4Q08624 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc4Q08624 Gm13665-201ENSMUST00000120830 528 ntBASIC12.27□□□□□ -0.45
Hoxc4Q08624 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.27□□□□□ -0.45
Hoxc4Q08624 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.27□□□□□ -0.45
Hoxc4Q08624 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.27□□□□□ -0.45
Hoxc4Q08624 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc4Q08624 Gm39404-201ENSMUST00000216350 313 ntBASIC12.27□□□□□ -0.45
Hoxc4Q08624 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.27□□□□□ -0.45
Hoxc4Q08624 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc4Q08624 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc4Q08624 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Hoxc4Q08624 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc4Q08624 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc4Q08624 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Hoxc4Q08624 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc4Q08624 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.27□□□□□ -0.45
Hoxc4Q08624 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.27□□□□□ -0.45
Hoxc4Q08624 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc4Q08624 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc4Q08624 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Hoxc4Q08624 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc4Q08624 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc4Q08624 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc4Q08624 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc4Q08624 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.27□□□□□ -0.45
Hoxc4Q08624 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc4Q08624 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc4Q08624 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc4Q08624 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Hoxc4Q08624 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.45
Hoxc4Q08624 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc4Q08624 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc4Q08624 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Hoxc4Q08624 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc4Q08624 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.26□□□□□ -0.45
Hoxc4Q08624 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Hoxc4Q08624 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc4Q08624 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.26□□□□□ -0.45
Hoxc4Q08624 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc4Q08624 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc4Q08624 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.26□□□□□ -0.45
Hoxc4Q08624 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc4Q08624 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc4Q08624 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Hoxc4Q08624 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc4Q08624 Gm12015-201ENSMUST00000117065 843 ntBASIC12.26□□□□□ -0.45
Hoxc4Q08624 Gm14832-201ENSMUST00000121289 322 ntBASIC12.26□□□□□ -0.45
Hoxc4Q08624 Gm24845-201ENSMUST00000158034 109 ntBASIC12.26□□□□□ -0.45
Hoxc4Q08624 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.26□□□□□ -0.45
Hoxc4Q08624 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms