Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf1Q07802 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ebf1Q07802 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.99□□□□□ -0.33
Ebf1Q07802 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf1Q07802 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf1Q07802 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf1Q07802 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.98□□□□□ -0.33
Ebf1Q07802 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf1Q07802 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf1Q07802 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ebf1Q07802 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf1Q07802 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ebf1Q07802 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf1Q07802 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ebf1Q07802 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf1Q07802 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.98□□□□□ -0.33
Ebf1Q07802 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf1Q07802 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf1Q07802 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.98□□□□□ -0.33
Ebf1Q07802 Gm17208-201ENSMUST00000168388 535 ntBASIC12.98□□□□□ -0.33
Ebf1Q07802 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.98□□□□□ -0.33
Ebf1Q07802 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.98□□□□□ -0.33
Ebf1Q07802 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.98□□□□□ -0.33
Ebf1Q07802 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf1Q07802 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.98□□□□□ -0.33
Ebf1Q07802 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf1Q07802 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf1Q07802 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf1Q07802 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf1Q07802 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf1Q07802 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf1Q07802 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ebf1Q07802 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf1Q07802 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Ebf1Q07802 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf1Q07802 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf1Q07802 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ebf1Q07802 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.98□□□□□ -0.33
Ebf1Q07802 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ebf1Q07802 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf1Q07802 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.97□□□□□ -0.33
Ebf1Q07802 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf1Q07802 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf1Q07802 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf1Q07802 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ebf1Q07802 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.97□□□□□ -0.33
Ebf1Q07802 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ebf1Q07802 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Ebf1Q07802 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf1Q07802 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ebf1Q07802 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf1Q07802 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf1Q07802 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf1Q07802 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf1Q07802 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.97□□□□□ -0.33
Ebf1Q07802 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.97□□□□□ -0.33
Ebf1Q07802 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ebf1Q07802 Gm31256-201ENSMUST00000194705 506 ntBASIC12.97□□□□□ -0.33
Ebf1Q07802 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf1Q07802 Gm45186-201ENSMUST00000206874 478 ntBASIC12.97□□□□□ -0.33
Ebf1Q07802 Gm13097-201ENSMUST00000210722 397 ntBASIC12.97□□□□□ -0.33
Ebf1Q07802 Gm18212-201ENSMUST00000211678 889 ntBASIC12.97□□□□□ -0.33
Ebf1Q07802 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.97□□□□□ -0.33
Ebf1Q07802 Gm32025-201ENSMUST00000217960 307 ntBASIC12.97□□□□□ -0.33
Ebf1Q07802 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.97□□□□□ -0.33
Ebf1Q07802 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ebf1Q07802 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ebf1Q07802 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf1Q07802 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf1Q07802 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf1Q07802 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf1Q07802 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf1Q07802 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf1Q07802 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.97□□□□□ -0.33
Ebf1Q07802 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf1Q07802 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf1Q07802 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf1Q07802 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf1Q07802 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ebf1Q07802 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf1Q07802 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.96□□□□□ -0.33
Ebf1Q07802 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.96□□□□□ -0.33
Ebf1Q07802 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf1Q07802 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf1Q07802 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf1Q07802 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf1Q07802 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf1Q07802 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.96□□□□□ -0.33
Ebf1Q07802 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf1Q07802 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.96□□□□□ -0.33
Ebf1Q07802 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.96□□□□□ -0.33
Ebf1Q07802 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.96□□□□□ -0.33
Ebf1Q07802 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf1Q07802 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.96□□□□□ -0.33
Ebf1Q07802 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.96□□□□□ -0.33
Ebf1Q07802 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf1Q07802 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Ebf1Q07802 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf1Q07802 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ebf1Q07802 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms