Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.05□□□□□ -0.32
Thumpd3P97770 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Thumpd3P97770 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Thumpd3P97770 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Thumpd3P97770 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Thumpd3P97770 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Thumpd3P97770 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Thumpd3P97770 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Thumpd3P97770 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Thumpd3P97770 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Thumpd3P97770 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Thumpd3P97770 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.05□□□□□ -0.32
Thumpd3P97770 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Thumpd3P97770 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Thumpd3P97770 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Thumpd3P97770 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Thumpd3P97770 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd3P97770 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd3P97770 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.04□□□□□ -0.32
Thumpd3P97770 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd3P97770 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd3P97770 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd3P97770 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd3P97770 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd3P97770 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Thumpd3P97770 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd3P97770 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd3P97770 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd3P97770 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd3P97770 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.04□□□□□ -0.32
Thumpd3P97770 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.04□□□□□ -0.32
Thumpd3P97770 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.04□□□□□ -0.32
Thumpd3P97770 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.04□□□□□ -0.32
Thumpd3P97770 Mir1894-201ENSMUST00000122802 81 ntBASIC13.04□□□□□ -0.32
Thumpd3P97770 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd3P97770 Gm15429-201ENSMUST00000151268 798 ntBASIC13.04□□□□□ -0.32
Thumpd3P97770 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.04□□□□□ -0.32
Thumpd3P97770 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.04□□□□□ -0.32
Thumpd3P97770 Mir7085-201ENSMUST00000184353 66 ntBASIC13.04□□□□□ -0.32
Thumpd3P97770 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd3P97770 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.04□□□□□ -0.32
Thumpd3P97770 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.04□□□□□ -0.32
Thumpd3P97770 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd3P97770 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd3P97770 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Thumpd3P97770 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.04□□□□□ -0.32
Thumpd3P97770 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd3P97770 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd3P97770 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd3P97770 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd3P97770 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.04□□□□□ -0.32
Thumpd3P97770 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd3P97770 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.04□□□□□ -0.32
Thumpd3P97770 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Thumpd3P97770 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Thumpd3P97770 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd3P97770 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd3P97770 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.04□□□□□ -0.32
Thumpd3P97770 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd3P97770 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd3P97770 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Thumpd3P97770 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd3P97770 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd3P97770 Matn2-203ENSMUST00000226766 3252 ntBASIC13.03□□□□□ -0.32
Thumpd3P97770 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd3P97770 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.03□□□□□ -0.32
Thumpd3P97770 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd3P97770 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd3P97770 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.03□□□□□ -0.32
Thumpd3P97770 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd3P97770 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd3P97770 Gm11425-201ENSMUST00000119608 498 ntBASIC13.03□□□□□ -0.32
Thumpd3P97770 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd3P97770 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd3P97770 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Thumpd3P97770 Gm38144-201ENSMUST00000192790 465 ntBASIC13.03□□□□□ -0.32
Thumpd3P97770 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd3P97770 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.03□□□□□ -0.32
Thumpd3P97770 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd3P97770 Gm9396-201ENSMUST00000076703 567 ntBASIC13.03□□□□□ -0.32
Thumpd3P97770 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd3P97770 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd3P97770 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd3P97770 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Thumpd3P97770 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd3P97770 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.03□□□□□ -0.32
Thumpd3P97770 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd3P97770 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd3P97770 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Thumpd3P97770 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.03□□□□□ -0.32
Thumpd3P97770 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.03□□□□□ -0.32
Thumpd3P97770 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.03□□□□□ -0.32
Thumpd3P97770 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Thumpd3P97770 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Thumpd3P97770 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Thumpd3P97770 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Thumpd3P97770 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.02□□□□□ -0.32
Thumpd3P97770 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.02□□□□□ -0.32
Thumpd3P97770 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Thumpd3P97770 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms