Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
PrkdcP97313 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PrkdcP97313 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PrkdcP97313 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
PrkdcP97313 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
PrkdcP97313 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
PrkdcP97313 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PrkdcP97313 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
PrkdcP97313 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PrkdcP97313 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC8.42□□□□□ -1.06
PrkdcP97313 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PrkdcP97313 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
PrkdcP97313 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PrkdcP97313 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
PrkdcP97313 Gm15004-201ENSMUST00000119192 630 ntBASIC8.42□□□□□ -1.06
PrkdcP97313 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC8.42□□□□□ -1.06
PrkdcP97313 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC8.42□□□□□ -1.06
PrkdcP97313 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC8.42□□□□□ -1.06
PrkdcP97313 Gm22442-201ENSMUST00000157256 144 ntBASIC8.42□□□□□ -1.06
PrkdcP97313 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC8.42□□□□□ -1.06
PrkdcP97313 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PrkdcP97313 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PrkdcP97313 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PrkdcP97313 Rps3a2-201ENSMUST00000074245 792 ntBASIC8.42□□□□□ -1.06
PrkdcP97313 Rps3a3-201ENSMUST00000074680 795 ntBASIC8.42□□□□□ -1.06
PrkdcP97313 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
PrkdcP97313 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC8.42□□□□□ -1.06
PrkdcP97313 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PrkdcP97313 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
PrkdcP97313 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PrkdcP97313 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PrkdcP97313 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PrkdcP97313 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PrkdcP97313 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PrkdcP97313 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC8.42□□□□□ -1.06
PrkdcP97313 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PrkdcP97313 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PrkdcP97313 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC8.42□□□□□ -1.06
PrkdcP97313 Gm17944-201ENSMUST00000186351 643 ntBASIC8.42□□□□□ -1.06
PrkdcP97313 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
PrkdcP97313 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PrkdcP97313 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
PrkdcP97313 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PrkdcP97313 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
PrkdcP97313 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC8.42□□□□□ -1.06
PrkdcP97313 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
PrkdcP97313 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
PrkdcP97313 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PrkdcP97313 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
PrkdcP97313 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PrkdcP97313 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PrkdcP97313 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
PrkdcP97313 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
PrkdcP97313 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
PrkdcP97313 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
PrkdcP97313 Gm26134-201ENSMUST00000178484 110 ntBASIC8.42□□□□□ -1.06
PrkdcP97313 Gm9022-201ENSMUST00000182482 992 ntBASIC8.42□□□□□ -1.06
PrkdcP97313 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
PrkdcP97313 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PrkdcP97313 Gm9204-201ENSMUST00000212641 947 ntBASIC8.42□□□□□ -1.06
PrkdcP97313 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC8.42□□□□□ -1.06
PrkdcP97313 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PrkdcP97313 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
PrkdcP97313 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
PrkdcP97313 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
PrkdcP97313 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PrkdcP97313 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
PrkdcP97313 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
PrkdcP97313 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC8.42□□□□□ -1.06
PrkdcP97313 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
PrkdcP97313 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC8.41□□□□□ -1.06
PrkdcP97313 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PrkdcP97313 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
PrkdcP97313 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
PrkdcP97313 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PrkdcP97313 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
PrkdcP97313 Gm23400-201ENSMUST00000174994 102 ntBASIC8.41□□□□□ -1.06
PrkdcP97313 Gm26463-201ENSMUST00000175065 101 ntBASIC8.41□□□□□ -1.06
PrkdcP97313 Gm24332-201ENSMUST00000175102 102 ntBASIC8.41□□□□□ -1.06
PrkdcP97313 Gm25959-201ENSMUST00000175112 102 ntBASIC8.41□□□□□ -1.06
PrkdcP97313 Gm22475-201ENSMUST00000175169 102 ntBASIC8.41□□□□□ -1.06
PrkdcP97313 Gm22903-201ENSMUST00000175193 102 ntBASIC8.41□□□□□ -1.06
PrkdcP97313 Gm25070-201ENSMUST00000175237 102 ntBASIC8.41□□□□□ -1.06
PrkdcP97313 Gm24159-201ENSMUST00000175264 102 ntBASIC8.41□□□□□ -1.06
PrkdcP97313 Gm25299-201ENSMUST00000175283 102 ntBASIC8.41□□□□□ -1.06
PrkdcP97313 Gm23798-201ENSMUST00000175560 102 ntBASIC8.41□□□□□ -1.06
PrkdcP97313 Gm23802-201ENSMUST00000175565 102 ntBASIC8.41□□□□□ -1.06
PrkdcP97313 Gm25708-201ENSMUST00000177687 102 ntBASIC8.41□□□□□ -1.06
PrkdcP97313 Gm24370-201ENSMUST00000178007 102 ntBASIC8.41□□□□□ -1.06
PrkdcP97313 Gm23049-201ENSMUST00000178068 102 ntBASIC8.41□□□□□ -1.06
PrkdcP97313 Gm28019-201ENSMUST00000178138 101 ntBASIC8.41□□□□□ -1.06
PrkdcP97313 Gm25571-201ENSMUST00000178322 102 ntBASIC8.41□□□□□ -1.06
PrkdcP97313 Gm25355-201ENSMUST00000178456 101 ntBASIC8.41□□□□□ -1.06
PrkdcP97313 Gm24975-201ENSMUST00000178492 101 ntBASIC8.41□□□□□ -1.06
PrkdcP97313 Gm23189-201ENSMUST00000178954 102 ntBASIC8.41□□□□□ -1.06
PrkdcP97313 Gm25100-201ENSMUST00000179750 101 ntBASIC8.41□□□□□ -1.06
PrkdcP97313 Gm23064-201ENSMUST00000179866 101 ntBASIC8.41□□□□□ -1.06
PrkdcP97313 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC8.41□□□□□ -1.06
PrkdcP97313 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
PrkdcP97313 Gm30671-201ENSMUST00000214898 318 ntBASIC8.41□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms