Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.26□□□□□ -0.61
Lsm6P62313 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Lsm6P62313 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm6P62313 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm6P62313 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm6P62313 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.26□□□□□ -0.61
Lsm6P62313 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm6P62313 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Lsm6P62313 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.26□□□□□ -0.61
Lsm6P62313 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm6P62313 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm6P62313 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Lsm6P62313 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Lsm6P62313 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm6P62313 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.26□□□□□ -0.61
Lsm6P62313 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm6P62313 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm6P62313 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm6P62313 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Lsm6P62313 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lsm6P62313 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Lsm6P62313 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm6P62313 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm6P62313 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm6P62313 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.25□□□□□ -0.61
Lsm6P62313 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.25□□□□□ -0.61
Lsm6P62313 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm6P62313 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm6P62313 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm6P62313 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm6P62313 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Lsm6P62313 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm6P62313 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Lsm6P62313 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm6P62313 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.25□□□□□ -0.61
Lsm6P62313 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm6P62313 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm6P62313 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.25□□□□□ -0.61
Lsm6P62313 Gm24644-201ENSMUST00000157114 139 ntBASIC11.25□□□□□ -0.61
Lsm6P62313 Gm22121-201ENSMUST00000175148 54 ntBASIC11.25□□□□□ -0.61
Lsm6P62313 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm6P62313 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm6P62313 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm6P62313 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm6P62313 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm6P62313 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.25□□□□□ -0.61
Lsm6P62313 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm6P62313 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.25□□□□□ -0.61
Lsm6P62313 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Lsm6P62313 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm6P62313 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm6P62313 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Lsm6P62313 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm6P62313 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Lsm6P62313 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm6P62313 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm6P62313 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lsm6P62313 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm6P62313 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm6P62313 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm6P62313 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm6P62313 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm6P62313 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Lsm6P62313 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.24□□□□□ -0.61
Lsm6P62313 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm6P62313 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm6P62313 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm6P62313 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Lsm6P62313 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Lsm6P62313 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.24□□□□□ -0.61
Lsm6P62313 Gm14704-201ENSMUST00000120300 874 ntBASIC11.24□□□□□ -0.61
Lsm6P62313 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.24□□□□□ -0.61
Lsm6P62313 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm6P62313 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.24□□□□□ -0.61
Lsm6P62313 Gm17208-201ENSMUST00000168388 535 ntBASIC11.24□□□□□ -0.61
Lsm6P62313 Gm4271-201ENSMUST00000174444 973 ntBASIC11.24□□□□□ -0.61
Lsm6P62313 Gm23363-201ENSMUST00000175024 79 ntBASIC11.24□□□□□ -0.61
Lsm6P62313 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.24□□□□□ -0.61
Lsm6P62313 Gm27331-201ENSMUST00000183705 60 ntBASIC11.24□□□□□ -0.61
Lsm6P62313 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC11.24□□□□□ -0.61
Lsm6P62313 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.24□□□□□ -0.61
Lsm6P62313 Gm4768-201ENSMUST00000206199 686 ntBASIC11.24□□□□□ -0.61
Lsm6P62313 Gm29705-201ENSMUST00000212598 474 ntBASIC11.24□□□□□ -0.61
Lsm6P62313 Gm5035-201ENSMUST00000215581 927 ntBASIC11.24□□□□□ -0.61
Lsm6P62313 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm6P62313 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm6P62313 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm6P62313 Gm10146-201ENSMUST00000072739 309 ntBASIC11.24□□□□□ -0.61
Lsm6P62313 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.24□□□□□ -0.61
Lsm6P62313 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Lsm6P62313 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Lsm6P62313 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.24□□□□□ -0.61
Lsm6P62313 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm6P62313 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm6P62313 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm6P62313 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm6P62313 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm6P62313 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lsm6P62313 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Lsm6P62313 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms