Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm3P62311 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm3P62311 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.64□□□□□ -0.55
Lsm3P62311 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC11.64□□□□□ -0.55
Lsm3P62311 Gm12350-201ENSMUST00000121208 462 ntBASIC11.64□□□□□ -0.55
Lsm3P62311 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm3P62311 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.64□□□□□ -0.55
Lsm3P62311 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.64□□□□□ -0.55
Lsm3P62311 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm3P62311 Mir8098-201ENSMUST00000184011 137 ntBASIC11.64□□□□□ -0.55
Lsm3P62311 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC11.64□□□□□ -0.55
Lsm3P62311 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm3P62311 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm3P62311 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC11.64□□□□□ -0.55
Lsm3P62311 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm3P62311 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC11.64□□□□□ -0.55
Lsm3P62311 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm3P62311 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm3P62311 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm3P62311 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm3P62311 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm3P62311 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm3P62311 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.64□□□□□ -0.55
Lsm3P62311 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm3P62311 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm3P62311 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm3P62311 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm3P62311 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Lsm3P62311 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm3P62311 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.63□□□□□ -0.55
Lsm3P62311 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm3P62311 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.63□□□□□ -0.55
Lsm3P62311 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC11.63□□□□□ -0.55
Lsm3P62311 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Lsm3P62311 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm3P62311 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.63□□□□□ -0.55
Lsm3P62311 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm3P62311 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Lsm3P62311 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC11.63□□□□□ -0.55
Lsm3P62311 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm3P62311 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm3P62311 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm3P62311 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.63□□□□□ -0.55
Lsm3P62311 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.63□□□□□ -0.55
Lsm3P62311 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm3P62311 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11.63□□□□□ -0.55
Lsm3P62311 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC11.63□□□□□ -0.55
Lsm3P62311 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Lsm3P62311 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm3P62311 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm3P62311 Gm9719-201ENSMUST00000162765 543 ntBASIC11.63□□□□□ -0.55
Lsm3P62311 Gm24420-201ENSMUST00000176676 59 ntBASIC11.63□□□□□ -0.55
Lsm3P62311 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.63□□□□□ -0.55
Lsm3P62311 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.63□□□□□ -0.55
Lsm3P62311 Gm18049-201ENSMUST00000208909 581 ntBASIC11.63□□□□□ -0.55
Lsm3P62311 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Lsm3P62311 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm3P62311 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm3P62311 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm3P62311 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm3P62311 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Lsm3P62311 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm3P62311 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm3P62311 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Lsm3P62311 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Lsm3P62311 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm3P62311 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm3P62311 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm3P62311 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Lsm3P62311 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Lsm3P62311 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm3P62311 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Lsm3P62311 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm3P62311 Gm6018-201ENSMUST00000216090 1306 ntBASIC11.62□□□□□ -0.55
Lsm3P62311 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm3P62311 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Lsm3P62311 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm3P62311 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm3P62311 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.62□□□□□ -0.55
Lsm3P62311 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Lsm3P62311 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Lsm3P62311 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Lsm3P62311 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm3P62311 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm3P62311 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Lsm3P62311 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.62□□□□□ -0.55
Lsm3P62311 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm3P62311 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm3P62311 Gm13884-201ENSMUST00000118103 829 ntBASIC11.62□□□□□ -0.55
Lsm3P62311 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC11.62□□□□□ -0.55
Lsm3P62311 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC11.62□□□□□ -0.55
Lsm3P62311 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC11.62□□□□□ -0.55
Lsm3P62311 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Lsm3P62311 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.62□□□□□ -0.55
Lsm3P62311 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.62□□□□□ -0.55
Lsm3P62311 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm3P62311 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm3P62311 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC11.62□□□□□ -0.55
Lsm3P62311 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Lsm3P62311 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms