Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3b6P59708 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3b6P59708 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.37□□□□□ -0.59
Sf3b6P59708 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3b6P59708 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3b6P59708 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Sf3b6P59708 Gm29667-201ENSMUST00000190817 490 ntBASIC11.37□□□□□ -0.59
Sf3b6P59708 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.37□□□□□ -0.59
Sf3b6P59708 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.37□□□□□ -0.59
Sf3b6P59708 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.37□□□□□ -0.59
Sf3b6P59708 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3b6P59708 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3b6P59708 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3b6P59708 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3b6P59708 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3b6P59708 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3b6P59708 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Sf3b6P59708 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.37□□□□□ -0.59
Sf3b6P59708 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3b6P59708 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3b6P59708 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sf3b6P59708 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3b6P59708 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3b6P59708 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3b6P59708 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3b6P59708 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Sf3b6P59708 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Sf3b6P59708 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3b6P59708 Map1b-203ENSMUST00000223725 2669 ntBASIC11.36□□□□□ -0.59
Sf3b6P59708 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Sf3b6P59708 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3b6P59708 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Sf3b6P59708 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3b6P59708 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3b6P59708 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3b6P59708 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.36□□□□□ -0.59
Sf3b6P59708 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3b6P59708 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Sf3b6P59708 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3b6P59708 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.36□□□□□ -0.59
Sf3b6P59708 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.36□□□□□ -0.59
Sf3b6P59708 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Sf3b6P59708 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.36□□□□□ -0.59
Sf3b6P59708 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Sf3b6P59708 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Sf3b6P59708 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3b6P59708 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3b6P59708 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3b6P59708 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3b6P59708 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3b6P59708 Gm9522-201ENSMUST00000182394 926 ntBASIC11.36□□□□□ -0.59
Sf3b6P59708 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3b6P59708 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3b6P59708 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3b6P59708 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3b6P59708 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3b6P59708 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3b6P59708 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3b6P59708 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3b6P59708 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Sf3b6P59708 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Sf3b6P59708 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3b6P59708 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3b6P59708 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3b6P59708 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Sf3b6P59708 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.36□□□□□ -0.59
Sf3b6P59708 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3b6P59708 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3b6P59708 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3b6P59708 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3b6P59708 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3b6P59708 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3b6P59708 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3b6P59708 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.35□□□□□ -0.59
Sf3b6P59708 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3b6P59708 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3b6P59708 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3b6P59708 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3b6P59708 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.35□□□□□ -0.59
Sf3b6P59708 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3b6P59708 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.35□□□□□ -0.59
Sf3b6P59708 Gm15321-201ENSMUST00000121290 288 ntBASIC11.35□□□□□ -0.59
Sf3b6P59708 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC11.35□□□□□ -0.59
Sf3b6P59708 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.35□□□□□ -0.59
Sf3b6P59708 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3b6P59708 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3b6P59708 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.35□□□□□ -0.59
Sf3b6P59708 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3b6P59708 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3b6P59708 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.35□□□□□ -0.59
Sf3b6P59708 Gm35960-201ENSMUST00000202712 767 ntBASIC11.35□□□□□ -0.59
Sf3b6P59708 Gm44855-201ENSMUST00000205725 362 ntBASIC11.35□□□□□ -0.59
Sf3b6P59708 Gm19078-201ENSMUST00000206311 727 ntBASIC11.35□□□□□ -0.59
Sf3b6P59708 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.35□□□□□ -0.59
Sf3b6P59708 CT009738.1-201ENSMUST00000219031 809 ntBASIC11.35□□□□□ -0.59
Sf3b6P59708 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3b6P59708 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3b6P59708 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Sf3b6P59708 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Sf3b6P59708 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms