Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cks2P56390 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cks2P56390 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cks2P56390 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cks2P56390 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cks2P56390 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
Cks2P56390 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cks2P56390 Pck2-205ENSMUST00000226352 2784 ntBASIC10.68□□□□□ -0.7
Cks2P56390 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Cks2P56390 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cks2P56390 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cks2P56390 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.68□□□□□ -0.7
Cks2P56390 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Cks2P56390 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cks2P56390 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.68□□□□□ -0.7
Cks2P56390 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cks2P56390 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cks2P56390 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Cks2P56390 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks2P56390 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks2P56390 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks2P56390 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks2P56390 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cks2P56390 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks2P56390 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.67□□□□□ -0.7
Cks2P56390 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks2P56390 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks2P56390 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks2P56390 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cks2P56390 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks2P56390 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks2P56390 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Cks2P56390 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks2P56390 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks2P56390 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cks2P56390 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks2P56390 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks2P56390 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks2P56390 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cks2P56390 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Cks2P56390 Gm5303-201ENSMUST00000117943 1252 ntBASIC10.67□□□□□ -0.7
Cks2P56390 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC10.67□□□□□ -0.7
Cks2P56390 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks2P56390 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC10.67□□□□□ -0.7
Cks2P56390 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC10.67□□□□□ -0.7
Cks2P56390 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cks2P56390 AC122305.4-201ENSMUST00000216159 1206 ntBASIC10.67□□□□□ -0.7
Cks2P56390 AC132863.2-201ENSMUST00000226643 799 ntBASIC10.67□□□□□ -0.7
Cks2P56390 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks2P56390 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks2P56390 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks2P56390 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks2P56390 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cks2P56390 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Cks2P56390 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks2P56390 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks2P56390 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks2P56390 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks2P56390 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks2P56390 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cks2P56390 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cks2P56390 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Cks2P56390 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks2P56390 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks2P56390 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks2P56390 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.66□□□□□ -0.7
Cks2P56390 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks2P56390 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks2P56390 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks2P56390 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Cks2P56390 Gm13813-201ENSMUST00000120998 787 ntBASIC10.66□□□□□ -0.7
Cks2P56390 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cks2P56390 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cks2P56390 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC10.66□□□□□ -0.7
Cks2P56390 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks2P56390 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.66□□□□□ -0.7
Cks2P56390 Gm44124-201ENSMUST00000204159 472 ntBASIC10.66□□□□□ -0.7
Cks2P56390 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks2P56390 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC10.66□□□□□ -0.7
Cks2P56390 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.66□□□□□ -0.7
Cks2P56390 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks2P56390 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks2P56390 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks2P56390 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks2P56390 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks2P56390 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks2P56390 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks2P56390 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Cks2P56390 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks2P56390 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks2P56390 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks2P56390 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.66□□□□□ -0.7
Cks2P56390 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks2P56390 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks2P56390 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks2P56390 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks2P56390 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cks2P56390 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.66□□□□□ -0.7
Cks2P56390 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cks2P56390 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms