Protein–RNA interactions for Protein: P54754

Ephb3, Ephrin type-B receptor 3, mousemouse

Known RBP Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ephb3P54754 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ephb3P54754 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ephb3P54754 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ephb3P54754 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ephb3P54754 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.39□□□□□ -0.27
Ephb3P54754 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ephb3P54754 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ephb3P54754 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ephb3P54754 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ephb3P54754 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ephb3P54754 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ephb3P54754 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ephb3P54754 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ephb3P54754 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.39□□□□□ -0.27
Ephb3P54754 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ephb3P54754 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ephb3P54754 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ephb3P54754 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ephb3P54754 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ephb3P54754 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ephb3P54754 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ephb3P54754 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ephb3P54754 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ephb3P54754 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ephb3P54754 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ephb3P54754 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ephb3P54754 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ephb3P54754 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ephb3P54754 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ephb3P54754 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ephb3P54754 Gm14999-201ENSMUST00000121039 624 ntBASIC13.38□□□□□ -0.27
Ephb3P54754 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ephb3P54754 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ephb3P54754 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.38□□□□□ -0.27
Ephb3P54754 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC13.38□□□□□ -0.27
Ephb3P54754 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.38□□□□□ -0.27
Ephb3P54754 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.38□□□□□ -0.27
Ephb3P54754 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.38□□□□□ -0.27
Ephb3P54754 Gm42790-201ENSMUST00000201268 969 ntBASIC13.38□□□□□ -0.27
Ephb3P54754 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ephb3P54754 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC13.38□□□□□ -0.27
Ephb3P54754 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.38□□□□□ -0.27
Ephb3P54754 Ntng1-201ENSMUST00000051253 327 ntBASIC13.38□□□□□ -0.27
Ephb3P54754 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ephb3P54754 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ephb3P54754 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.38□□□□□ -0.27
Ephb3P54754 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ephb3P54754 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ephb3P54754 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ephb3P54754 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ephb3P54754 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ephb3P54754 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.38□□□□□ -0.27
Ephb3P54754 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ephb3P54754 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Ephb3P54754 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ephb3P54754 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ephb3P54754 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ephb3P54754 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.37□□□□□ -0.27
Ephb3P54754 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ephb3P54754 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ephb3P54754 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.37□□□□□ -0.27
Ephb3P54754 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ephb3P54754 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ephb3P54754 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ephb3P54754 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.37□□□□□ -0.27
Ephb3P54754 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ephb3P54754 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Ephb3P54754 Gm12380-201ENSMUST00000119012 544 ntBASIC13.37□□□□□ -0.27
Ephb3P54754 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ephb3P54754 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.37□□□□□ -0.27
Ephb3P54754 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ephb3P54754 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ephb3P54754 Gm32999-201ENSMUST00000192693 562 ntBASIC13.37□□□□□ -0.27
Ephb3P54754 Gm44551-201ENSMUST00000208804 171 ntBASIC13.37□□□□□ -0.27
Ephb3P54754 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Ephb3P54754 AC122876.1-201ENSMUST00000217619 825 ntBASIC13.37□□□□□ -0.27
Ephb3P54754 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ephb3P54754 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Ephb3P54754 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ephb3P54754 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Ephb3P54754 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ephb3P54754 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ephb3P54754 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ephb3P54754 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ephb3P54754 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ephb3P54754 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ephb3P54754 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Ephb3P54754 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ephb3P54754 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ephb3P54754 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.36□□□□□ -0.27
Ephb3P54754 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ephb3P54754 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ephb3P54754 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ephb3P54754 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ephb3P54754 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ephb3P54754 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.36□□□□□ -0.27
Ephb3P54754 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ephb3P54754 Gm8018-201ENSMUST00000173536 789 ntBASIC13.36□□□□□ -0.27
Ephb3P54754 Gm19353-201ENSMUST00000184561 445 ntBASIC13.36□□□□□ -0.27
Ephb3P54754 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms