Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
ClgnP52194 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClgnP52194 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClgnP52194 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.1□□□□□ -0.31
ClgnP52194 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClgnP52194 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClgnP52194 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClgnP52194 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
ClgnP52194 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClgnP52194 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClgnP52194 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClgnP52194 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClgnP52194 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ClgnP52194 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ClgnP52194 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.09□□□□□ -0.31
ClgnP52194 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClgnP52194 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ClgnP52194 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClgnP52194 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
ClgnP52194 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClgnP52194 Gm16202-201ENSMUST00000117532 544 ntBASIC13.09□□□□□ -0.31
ClgnP52194 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ClgnP52194 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ClgnP52194 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClgnP52194 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ClgnP52194 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.09□□□□□ -0.31
ClgnP52194 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ClgnP52194 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.09□□□□□ -0.31
ClgnP52194 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.09□□□□□ -0.31
ClgnP52194 Gm9794-201ENSMUST00000202370 423 ntBASIC13.09□□□□□ -0.31
ClgnP52194 Gm44069-201ENSMUST00000204898 506 ntBASIC13.09□□□□□ -0.31
ClgnP52194 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClgnP52194 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.09□□□□□ -0.31
ClgnP52194 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.09□□□□□ -0.31
ClgnP52194 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClgnP52194 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClgnP52194 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ClgnP52194 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ClgnP52194 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClgnP52194 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClgnP52194 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClgnP52194 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ClgnP52194 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClgnP52194 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.09□□□□□ -0.31
ClgnP52194 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
ClgnP52194 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
ClgnP52194 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ClgnP52194 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
ClgnP52194 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
ClgnP52194 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
ClgnP52194 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.08□□□□□ -0.31
ClgnP52194 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClgnP52194 AC123738.2-201ENSMUST00000223791 1899 ntBASIC13.08□□□□□ -0.32
ClgnP52194 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClgnP52194 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClgnP52194 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClgnP52194 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClgnP52194 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.08□□□□□ -0.32
ClgnP52194 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.08□□□□□ -0.32
ClgnP52194 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClgnP52194 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
ClgnP52194 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.08□□□□□ -0.32
ClgnP52194 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClgnP52194 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.08□□□□□ -0.32
ClgnP52194 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClgnP52194 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ClgnP52194 Gm38671-201ENSMUST00000200573 130 ntBASIC13.08□□□□□ -0.32
ClgnP52194 Gm9908-201ENSMUST00000211534 448 ntBASIC13.08□□□□□ -0.32
ClgnP52194 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClgnP52194 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.08□□□□□ -0.32
ClgnP52194 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClgnP52194 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClgnP52194 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClgnP52194 Gm5356-201ENSMUST00000093326 615 ntBASIC13.08□□□□□ -0.32
ClgnP52194 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClgnP52194 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClgnP52194 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClgnP52194 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClgnP52194 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClgnP52194 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ClgnP52194 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClgnP52194 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClgnP52194 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
ClgnP52194 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
ClgnP52194 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClgnP52194 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClgnP52194 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ClgnP52194 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ClgnP52194 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClgnP52194 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClgnP52194 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClgnP52194 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
ClgnP52194 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClgnP52194 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClgnP52194 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClgnP52194 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClgnP52194 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClgnP52194 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ClgnP52194 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ClgnP52194 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms