Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf4P43488 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf4P43488 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf4P43488 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf4P43488 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.36□□□□□ -0.43
Tnfsf4P43488 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tnfsf4P43488 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf4P43488 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf4P43488 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Tnfsf4P43488 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf4P43488 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Tnfsf4P43488 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf4P43488 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf4P43488 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.35□□□□□ -0.43
Tnfsf4P43488 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf4P43488 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf4P43488 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf4P43488 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Tnfsf4P43488 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Tnfsf4P43488 Paupar-201ENSMUST00000194826 3482 ntBASIC12.35□□□□□ -0.43
Tnfsf4P43488 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf4P43488 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf4P43488 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Tnfsf4P43488 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf4P43488 Gm12291-201ENSMUST00000121627 311 ntBASIC12.35□□□□□ -0.43
Tnfsf4P43488 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.35□□□□□ -0.43
Tnfsf4P43488 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf4P43488 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.35□□□□□ -0.43
Tnfsf4P43488 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.35□□□□□ -0.43
Tnfsf4P43488 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.35□□□□□ -0.43
Tnfsf4P43488 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Tnfsf4P43488 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.35□□□□□ -0.43
Tnfsf4P43488 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.35□□□□□ -0.43
Tnfsf4P43488 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf4P43488 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf4P43488 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Tnfsf4P43488 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf4P43488 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf4P43488 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf4P43488 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.35□□□□□ -0.43
Tnfsf4P43488 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf4P43488 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf4P43488 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf4P43488 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf4P43488 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf4P43488 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Tnfsf4P43488 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf4P43488 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf4P43488 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tnfsf4P43488 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf4P43488 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Tnfsf4P43488 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf4P43488 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf4P43488 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.34□□□□□ -0.43
Tnfsf4P43488 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf4P43488 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf4P43488 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf4P43488 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf4P43488 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf4P43488 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.34□□□□□ -0.43
Tnfsf4P43488 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf4P43488 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf4P43488 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf4P43488 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf4P43488 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf4P43488 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.34□□□□□ -0.43
Tnfsf4P43488 Gm28693-202ENSMUST00000190758 331 ntBASIC12.34□□□□□ -0.43
Tnfsf4P43488 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.34□□□□□ -0.43
Tnfsf4P43488 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.34□□□□□ -0.43
Tnfsf4P43488 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf4P43488 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf4P43488 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf4P43488 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf4P43488 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf4P43488 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Tnfsf4P43488 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf4P43488 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf4P43488 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf4P43488 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.34□□□□□ -0.43
Tnfsf4P43488 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Tnfsf4P43488 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.43
Tnfsf4P43488 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Tnfsf4P43488 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.33□□□□□ -0.43
Tnfsf4P43488 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfsf4P43488 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfsf4P43488 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.33□□□□□ -0.44
Tnfsf4P43488 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfsf4P43488 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfsf4P43488 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfsf4P43488 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfsf4P43488 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfsf4P43488 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.33□□□□□ -0.44
Tnfsf4P43488 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfsf4P43488 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Tnfsf4P43488 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Tnfsf4P43488 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.33□□□□□ -0.44
Tnfsf4P43488 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.33□□□□□ -0.44
Tnfsf4P43488 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.33□□□□□ -0.44
Tnfsf4P43488 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfsf4P43488 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms