Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Gm12416-201ENSMUST00000120911 1008 ntBASIC10.58□□□□□ -0.72
Hist1h1aP43275 Gm14719-201ENSMUST00000121891 340 ntBASIC10.58□□□□□ -0.72
Hist1h1aP43275 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC10.58□□□□□ -0.72
Hist1h1aP43275 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Gm44872-201ENSMUST00000207864 420 ntBASIC10.58□□□□□ -0.72
Hist1h1aP43275 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Hist1h1aP43275 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 AC134335.2-201ENSMUST00000227660 440 ntBASIC10.58□□□□□ -0.72
Hist1h1aP43275 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Hist1h2al-201ENSMUST00000091708 339 ntBASIC10.58□□□□□ -0.72
Hist1h1aP43275 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.58□□□□□ -0.72
Hist1h1aP43275 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Hist1h1aP43275 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Hist1h1aP43275 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist1h1aP43275 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist1h1aP43275 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.57□□□□□ -0.72
Hist1h1aP43275 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hist1h1aP43275 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.57□□□□□ -0.72
Hist1h1aP43275 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist1h1aP43275 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist1h1aP43275 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist1h1aP43275 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hist1h1aP43275 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hist1h1aP43275 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist1h1aP43275 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist1h1aP43275 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.57□□□□□ -0.72
Hist1h1aP43275 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.57□□□□□ -0.72
Hist1h1aP43275 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist1h1aP43275 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hist1h1aP43275 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Hist1h1aP43275 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hist1h1aP43275 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist1h1aP43275 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC10.57□□□□□ -0.72
Hist1h1aP43275 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist1h1aP43275 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC10.57□□□□□ -0.72
Hist1h1aP43275 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hist1h1aP43275 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC10.57□□□□□ -0.72
Hist1h1aP43275 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist1h1aP43275 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist1h1aP43275 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist1h1aP43275 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist1h1aP43275 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist1h1aP43275 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist1h1aP43275 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist1h1aP43275 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist1h1aP43275 Gm43045-201ENSMUST00000198725 2095 ntBASIC10.57□□□□□ -0.72
Hist1h1aP43275 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Hist1h1aP43275 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist1h1aP43275 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist1h1aP43275 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hist1h1aP43275 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms