Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-2P42586 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Nkx2-2P42586 Gm15703-201ENSMUST00000120250 880 ntBASIC11.73□□□□□ -0.53
Nkx2-2P42586 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-2P42586 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-2P42586 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.73□□□□□ -0.53
Nkx2-2P42586 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-2P42586 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-2P42586 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.73□□□□□ -0.53
Nkx2-2P42586 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.73□□□□□ -0.53
Nkx2-2P42586 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.73□□□□□ -0.53
Nkx2-2P42586 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.73□□□□□ -0.53
Nkx2-2P42586 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-2P42586 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-2P42586 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-2P42586 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-2P42586 Snora73a-201ENSMUST00000082453 205 ntBASIC11.73□□□□□ -0.53
Nkx2-2P42586 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-2P42586 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-2P42586 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Nkx2-2P42586 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-2P42586 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-2P42586 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-2P42586 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-2P42586 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-2P42586 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-2P42586 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nkx2-2P42586 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.73□□□□□ -0.53
Nkx2-2P42586 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.72□□□□□ -0.53
Nkx2-2P42586 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Nkx2-2P42586 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-2P42586 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-2P42586 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-2P42586 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-2P42586 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-2P42586 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-2P42586 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-2P42586 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-2P42586 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-2P42586 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-2P42586 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-2P42586 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.72□□□□□ -0.53
Nkx2-2P42586 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.72□□□□□ -0.53
Nkx2-2P42586 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-2P42586 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Nkx2-2P42586 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-2P42586 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-2P42586 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-2P42586 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.72□□□□□ -0.53
Nkx2-2P42586 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.72□□□□□ -0.53
Nkx2-2P42586 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.72□□□□□ -0.53
Nkx2-2P42586 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.72□□□□□ -0.53
Nkx2-2P42586 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-2P42586 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-2P42586 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-2P42586 Gm26035-201ENSMUST00000083065 308 ntBASIC11.72□□□□□ -0.53
Nkx2-2P42586 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-2P42586 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-2P42586 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-2P42586 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-2P42586 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Nkx2-2P42586 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.72□□□□□ -0.53
Nkx2-2P42586 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.72□□□□□ -0.53
Nkx2-2P42586 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-2P42586 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-2P42586 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nkx2-2P42586 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-2P42586 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Nkx2-2P42586 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-2P42586 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-2P42586 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Nkx2-2P42586 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Nkx2-2P42586 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.71□□□□□ -0.53
Nkx2-2P42586 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-2P42586 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-2P42586 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-2P42586 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Nkx2-2P42586 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-2P42586 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-2P42586 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.71□□□□□ -0.53
Nkx2-2P42586 Gm11591-201ENSMUST00000120063 702 ntBASIC11.71□□□□□ -0.53
Nkx2-2P42586 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.71□□□□□ -0.53
Nkx2-2P42586 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-2P42586 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-2P42586 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Nkx2-2P42586 Gm25927-201ENSMUST00000175058 117 ntBASIC11.71□□□□□ -0.53
Nkx2-2P42586 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-2P42586 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-2P42586 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-2P42586 Gm43433-201ENSMUST00000196573 481 ntBASIC11.71□□□□□ -0.53
Nkx2-2P42586 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Nkx2-2P42586 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.71□□□□□ -0.53
Nkx2-2P42586 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-2P42586 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-2P42586 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.71□□□□□ -0.53
Nkx2-2P42586 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-2P42586 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-2P42586 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-2P42586 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx2-2P42586 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms