Protein–RNA interactions for Protein: P40240

Cd9, CD9 antigen, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd9P40240 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd9P40240 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.62□□□□□ -0.39
Cd9P40240 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd9P40240 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd9P40240 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cd9P40240 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Cd9P40240 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd9P40240 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd9P40240 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.62□□□□□ -0.39
Cd9P40240 Gm24231-201ENSMUST00000104315 133 ntBASIC12.62□□□□□ -0.39
Cd9P40240 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd9P40240 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.62□□□□□ -0.39
Cd9P40240 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cd9P40240 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.62□□□□□ -0.39
Cd9P40240 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cd9P40240 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.62□□□□□ -0.39
Cd9P40240 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.62□□□□□ -0.39
Cd9P40240 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.62□□□□□ -0.39
Cd9P40240 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd9P40240 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd9P40240 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd9P40240 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Cd9P40240 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd9P40240 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cd9P40240 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cd9P40240 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd9P40240 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cd9P40240 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd9P40240 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cd9P40240 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.62□□□□□ -0.39
Cd9P40240 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd9P40240 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd9P40240 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.61□□□□□ -0.39
Cd9P40240 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd9P40240 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd9P40240 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd9P40240 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd9P40240 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd9P40240 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd9P40240 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Cd9P40240 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd9P40240 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.61□□□□□ -0.39
Cd9P40240 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
Cd9P40240 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Cd9P40240 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Cd9P40240 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cd9P40240 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Cd9P40240 Gm19184-201ENSMUST00000196798 928 ntBASIC12.61□□□□□ -0.39
Cd9P40240 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cd9P40240 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.61□□□□□ -0.39
Cd9P40240 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.61□□□□□ -0.39
Cd9P40240 Gm45930-201ENSMUST00000221330 292 ntBASIC12.61□□□□□ -0.39
Cd9P40240 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd9P40240 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd9P40240 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd9P40240 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cd9P40240 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.61□□□□□ -0.39
Cd9P40240 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cd9P40240 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.61□□□□□ -0.39
Cd9P40240 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cd9P40240 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd9P40240 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd9P40240 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cd9P40240 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cd9P40240 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd9P40240 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd9P40240 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.61□□□□□ -0.39
Cd9P40240 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cd9P40240 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cd9P40240 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd9P40240 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cd9P40240 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cd9P40240 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd9P40240 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd9P40240 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd9P40240 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cd9P40240 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cd9P40240 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd9P40240 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd9P40240 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd9P40240 Gm18584-201ENSMUST00000203098 964 ntBASIC12.6□□□□□ -0.39
Cd9P40240 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.6□□□□□ -0.39
Cd9P40240 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.6□□□□□ -0.39
Cd9P40240 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.6□□□□□ -0.39
Cd9P40240 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd9P40240 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cd9P40240 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.6□□□□□ -0.39
Cd9P40240 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cd9P40240 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Cd9P40240 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.6□□□□□ -0.39
Cd9P40240 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd9P40240 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd9P40240 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cd9P40240 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd9P40240 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cd9P40240 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.6□□□□□ -0.39
Cd9P40240 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cd9P40240 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cd9P40240 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.6□□□□□ -0.39
Cd9P40240 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms