Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cxcl12P40224 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cxcl12P40224 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cxcl12P40224 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cxcl12P40224 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Cxcl12P40224 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cxcl12P40224 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cxcl12P40224 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cxcl12P40224 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cxcl12P40224 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cxcl12P40224 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cxcl12P40224 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Cxcl12P40224 Gm12314-201ENSMUST00000118104 538 ntBASIC13.11□□□□□ -0.31
Cxcl12P40224 Gm12196-201ENSMUST00000120954 262 ntBASIC13.11□□□□□ -0.31
Cxcl12P40224 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC13.11□□□□□ -0.31
Cxcl12P40224 Gm25072-201ENSMUST00000175233 235 ntBASIC13.11□□□□□ -0.31
Cxcl12P40224 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC13.11□□□□□ -0.31
Cxcl12P40224 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC13.11□□□□□ -0.31
Cxcl12P40224 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC13.11□□□□□ -0.31
Cxcl12P40224 Prrxl1-205ENSMUST00000228878 723 ntBASIC13.11□□□□□ -0.31
Cxcl12P40224 Gm9873-201ENSMUST00000063891 1097 ntBASIC13.11□□□□□ -0.31
Cxcl12P40224 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC13.11□□□□□ -0.31
Cxcl12P40224 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cxcl12P40224 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cxcl12P40224 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Cxcl12P40224 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.11□□□□□ -0.31
Cxcl12P40224 Gm9129-201ENSMUST00000218173 1689 ntBASIC13.11□□□□□ -0.31
Cxcl12P40224 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cxcl12P40224 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cxcl12P40224 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cxcl12P40224 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cxcl12P40224 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cxcl12P40224 Gm13812-201ENSMUST00000118061 1347 ntBASIC13.11□□□□□ -0.31
Cxcl12P40224 Gm13810-201ENSMUST00000118584 1347 ntBASIC13.11□□□□□ -0.31
Cxcl12P40224 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cxcl12P40224 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cxcl12P40224 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cxcl12P40224 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cxcl12P40224 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cxcl12P40224 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cxcl12P40224 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cxcl12P40224 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.1□□□□□ -0.31
Cxcl12P40224 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cxcl12P40224 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cxcl12P40224 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cxcl12P40224 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cxcl12P40224 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cxcl12P40224 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cxcl12P40224 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cxcl12P40224 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cxcl12P40224 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cxcl12P40224 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cxcl12P40224 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cxcl12P40224 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cxcl12P40224 Gm25880-201ENSMUST00000104331 132 ntBASIC13.1□□□□□ -0.31
Cxcl12P40224 Gm24891-201ENSMUST00000104391 136 ntBASIC13.1□□□□□ -0.31
Cxcl12P40224 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Cxcl12P40224 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cxcl12P40224 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cxcl12P40224 Gm14314-201ENSMUST00000118225 1015 ntBASIC13.1□□□□□ -0.31
Cxcl12P40224 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.1□□□□□ -0.31
Cxcl12P40224 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Cxcl12P40224 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cxcl12P40224 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC13.1□□□□□ -0.31
Cxcl12P40224 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cxcl12P40224 H2-Q3-201ENSMUST00000172583 608 ntBASIC13.1□□□□□ -0.31
Cxcl12P40224 Gm23153-201ENSMUST00000175323 313 ntBASIC13.1□□□□□ -0.31
Cxcl12P40224 Gm34023-201ENSMUST00000195539 217 ntBASIC13.1□□□□□ -0.31
Cxcl12P40224 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cxcl12P40224 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC13.1□□□□□ -0.31
Cxcl12P40224 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC13.1□□□□□ -0.31
Cxcl12P40224 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC13.1□□□□□ -0.31
Cxcl12P40224 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC13.1□□□□□ -0.31
Cxcl12P40224 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cxcl12P40224 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cxcl12P40224 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cxcl12P40224 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cxcl12P40224 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Cxcl12P40224 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.1□□□□□ -0.31
Cxcl12P40224 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cxcl12P40224 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cxcl12P40224 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cxcl12P40224 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cxcl12P40224 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cxcl12P40224 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Cxcl12P40224 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cxcl12P40224 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cxcl12P40224 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cxcl12P40224 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cxcl12P40224 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cxcl12P40224 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cxcl12P40224 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cxcl12P40224 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cxcl12P40224 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Cxcl12P40224 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.09□□□□□ -0.31
Cxcl12P40224 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cxcl12P40224 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cxcl12P40224 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cxcl12P40224 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cxcl12P40224 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms