Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC10.53□□□□□ -0.72
Timp3P39876 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Timp3P39876 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Timp3P39876 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
Timp3P39876 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Timp3P39876 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Timp3P39876 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Timp3P39876 Gm6447-201ENSMUST00000118905 835 ntBASIC10.53□□□□□ -0.72
Timp3P39876 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Timp3P39876 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC10.53□□□□□ -0.72
Timp3P39876 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC10.53□□□□□ -0.72
Timp3P39876 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC10.53□□□□□ -0.72
Timp3P39876 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Timp3P39876 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.53□□□□□ -0.72
Timp3P39876 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.53□□□□□ -0.72
Timp3P39876 Gm37008-201ENSMUST00000195712 319 ntBASIC10.53□□□□□ -0.72
Timp3P39876 Gm45880-201ENSMUST00000213041 853 ntBASIC10.53□□□□□ -0.72
Timp3P39876 Tyms-ps-201ENSMUST00000219550 915 ntBASIC10.53□□□□□ -0.72
Timp3P39876 AC134254.1-201ENSMUST00000221362 167 ntBASIC10.53□□□□□ -0.72
Timp3P39876 AC133598.1-201ENSMUST00000224327 660 ntBASIC10.53□□□□□ -0.72
Timp3P39876 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Timp3P39876 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Timp3P39876 AC164426.2-201ENSMUST00000225993 2492 ntBASIC10.53□□□□□ -0.72
Timp3P39876 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Timp3P39876 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Timp3P39876 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Timp3P39876 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Timp3P39876 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Timp3P39876 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Timp3P39876 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Timp3P39876 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Timp3P39876 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Timp3P39876 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
Timp3P39876 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Timp3P39876 Gm5385-201ENSMUST00000118988 1559 ntBASIC10.52□□□□□ -0.72
Timp3P39876 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Timp3P39876 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Timp3P39876 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Timp3P39876 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Timp3P39876 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Timp3P39876 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Timp3P39876 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Timp3P39876 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Timp3P39876 Gm13123-201ENSMUST00000122173 492 ntBASIC10.52□□□□□ -0.73
Timp3P39876 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.52□□□□□ -0.73
Timp3P39876 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC10.52□□□□□ -0.73
Timp3P39876 Gm38002-201ENSMUST00000193255 180 ntBASIC10.52□□□□□ -0.73
Timp3P39876 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC10.52□□□□□ -0.73
Timp3P39876 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC10.52□□□□□ -0.73
Timp3P39876 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Timp3P39876 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Timp3P39876 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Timp3P39876 AC122305.4-201ENSMUST00000216159 1206 ntBASIC10.52□□□□□ -0.73
Timp3P39876 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.52□□□□□ -0.73
Timp3P39876 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.52□□□□□ -0.73
Timp3P39876 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Timp3P39876 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.52□□□□□ -0.73
Timp3P39876 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Timp3P39876 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.52□□□□□ -0.73
Timp3P39876 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Timp3P39876 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Timp3P39876 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Timp3P39876 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Timp3P39876 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Timp3P39876 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Timp3P39876 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Timp3P39876 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Timp3P39876 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC10.52□□□□□ -0.73
Timp3P39876 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.52□□□□□ -0.73
Timp3P39876 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Timp3P39876 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
Timp3P39876 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Timp3P39876 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Timp3P39876 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Timp3P39876 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Timp3P39876 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Timp3P39876 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Timp3P39876 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Timp3P39876 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Timp3P39876 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Timp3P39876 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Timp3P39876 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Timp3P39876 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Timp3P39876 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Timp3P39876 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Timp3P39876 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Timp3P39876 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Timp3P39876 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
Timp3P39876 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Timp3P39876 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC10.51□□□□□ -0.73
Timp3P39876 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC10.51□□□□□ -0.73
Timp3P39876 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Timp3P39876 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Timp3P39876 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Timp3P39876 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC10.51□□□□□ -0.73
Timp3P39876 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC10.51□□□□□ -0.73
Timp3P39876 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Timp3P39876 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Timp3P39876 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC10.51□□□□□ -0.73
Timp3P39876 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms