Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nedd8P29595 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.8□□□□□ -0.52
Nedd8P29595 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nedd8P29595 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nedd8P29595 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nedd8P29595 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nedd8P29595 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC11.8□□□□□ -0.52
Nedd8P29595 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.8□□□□□ -0.52
Nedd8P29595 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nedd8P29595 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nedd8P29595 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nedd8P29595 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nedd8P29595 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.8□□□□□ -0.52
Nedd8P29595 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.8□□□□□ -0.52
Nedd8P29595 Gm13886-201ENSMUST00000117876 1183 ntBASIC11.8□□□□□ -0.52
Nedd8P29595 Gm13015-201ENSMUST00000118674 204 ntBASIC11.8□□□□□ -0.52
Nedd8P29595 Gm11025-201ENSMUST00000140773 466 ntBASIC11.8□□□□□ -0.52
Nedd8P29595 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.8□□□□□ -0.52
Nedd8P29595 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nedd8P29595 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nedd8P29595 Gm44945-201ENSMUST00000206764 1187 ntBASIC11.8□□□□□ -0.52
Nedd8P29595 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nedd8P29595 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nedd8P29595 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nedd8P29595 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nedd8P29595 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nedd8P29595 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nedd8P29595 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nedd8P29595 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nedd8P29595 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.8□□□□□ -0.52
Nedd8P29595 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nedd8P29595 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Nedd8P29595 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Nedd8P29595 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nedd8P29595 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nedd8P29595 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nedd8P29595 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.79□□□□□ -0.52
Nedd8P29595 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nedd8P29595 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Nedd8P29595 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Nedd8P29595 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nedd8P29595 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nedd8P29595 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nedd8P29595 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nedd8P29595 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nedd8P29595 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nedd8P29595 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nedd8P29595 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nedd8P29595 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.79□□□□□ -0.52
Nedd8P29595 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC11.79□□□□□ -0.52
Nedd8P29595 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nedd8P29595 Gm7063-201ENSMUST00000186840 981 ntBASIC11.79□□□□□ -0.52
Nedd8P29595 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nedd8P29595 Gm19184-201ENSMUST00000196798 928 ntBASIC11.79□□□□□ -0.52
Nedd8P29595 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nedd8P29595 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC11.79□□□□□ -0.52
Nedd8P29595 AC154222.1-201ENSMUST00000223882 475 ntBASIC11.79□□□□□ -0.52
Nedd8P29595 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC11.79□□□□□ -0.52
Nedd8P29595 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.79□□□□□ -0.52
Nedd8P29595 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nedd8P29595 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nedd8P29595 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nedd8P29595 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nedd8P29595 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Nedd8P29595 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nedd8P29595 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nedd8P29595 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nedd8P29595 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nedd8P29595 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nedd8P29595 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nedd8P29595 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nedd8P29595 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nedd8P29595 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nedd8P29595 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Nedd8P29595 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Nedd8P29595 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.78□□□□□ -0.52
Nedd8P29595 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Nedd8P29595 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nedd8P29595 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Nedd8P29595 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Nedd8P29595 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nedd8P29595 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.78□□□□□ -0.52
Nedd8P29595 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.78□□□□□ -0.52
Nedd8P29595 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nedd8P29595 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nedd8P29595 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nedd8P29595 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Nedd8P29595 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.78□□□□□ -0.52
Nedd8P29595 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nedd8P29595 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nedd8P29595 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nedd8P29595 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nedd8P29595 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.78□□□□□ -0.52
Nedd8P29595 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Nedd8P29595 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Nedd8P29595 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
Nedd8P29595 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Nedd8P29595 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC11.78□□□□□ -0.52
Nedd8P29595 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Nedd8P29595 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms