Protein–RNA interactions for Protein: P28653

Bgn, Biglycan, mousemouse

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BgnP28653 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
BgnP28653 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
BgnP28653 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
BgnP28653 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
BgnP28653 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.85□□□□□ -0.51
BgnP28653 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BgnP28653 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BgnP28653 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BgnP28653 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.85□□□□□ -0.51
BgnP28653 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
BgnP28653 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
BgnP28653 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
BgnP28653 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BgnP28653 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.85□□□□□ -0.51
BgnP28653 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
BgnP28653 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BgnP28653 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
BgnP28653 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
BgnP28653 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.85□□□□□ -0.51
BgnP28653 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.85□□□□□ -0.51
BgnP28653 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
BgnP28653 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BgnP28653 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
BgnP28653 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
BgnP28653 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.84□□□□□ -0.51
BgnP28653 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BgnP28653 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
BgnP28653 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
BgnP28653 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
BgnP28653 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.84□□□□□ -0.51
BgnP28653 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
BgnP28653 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BgnP28653 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
BgnP28653 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.84□□□□□ -0.51
BgnP28653 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BgnP28653 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BgnP28653 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.84□□□□□ -0.51
BgnP28653 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
BgnP28653 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
BgnP28653 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.84□□□□□ -0.51
BgnP28653 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
BgnP28653 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BgnP28653 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
BgnP28653 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
BgnP28653 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.84□□□□□ -0.51
BgnP28653 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
BgnP28653 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
BgnP28653 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
BgnP28653 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BgnP28653 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
BgnP28653 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
BgnP28653 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BgnP28653 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
BgnP28653 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.84□□□□□ -0.51
BgnP28653 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC11.84□□□□□ -0.51
BgnP28653 Gm3436-201ENSMUST00000179930 840 ntBASIC11.84□□□□□ -0.51
BgnP28653 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.84□□□□□ -0.51
BgnP28653 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
BgnP28653 Gm7774-201ENSMUST00000200064 533 ntBASIC11.84□□□□□ -0.51
BgnP28653 Gm43703-201ENSMUST00000200523 763 ntBASIC11.84□□□□□ -0.51
BgnP28653 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BgnP28653 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC11.84□□□□□ -0.51
BgnP28653 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
BgnP28653 Gm17795-201ENSMUST00000214505 757 ntBASIC11.84□□□□□ -0.51
BgnP28653 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC11.84□□□□□ -0.51
BgnP28653 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.84□□□□□ -0.51
BgnP28653 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BgnP28653 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
BgnP28653 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BgnP28653 Gm5161-201ENSMUST00000075243 853 ntBASIC11.84□□□□□ -0.51
BgnP28653 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
BgnP28653 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
BgnP28653 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
BgnP28653 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
BgnP28653 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.84□□□□□ -0.51
BgnP28653 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
BgnP28653 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
BgnP28653 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.84□□□□□ -0.51
BgnP28653 Cog3-203ENSMUST00000227473 4197 ntBASIC11.84□□□□□ -0.51
BgnP28653 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
BgnP28653 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
BgnP28653 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
BgnP28653 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
BgnP28653 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
BgnP28653 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
BgnP28653 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
BgnP28653 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
BgnP28653 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
BgnP28653 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
BgnP28653 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
BgnP28653 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
BgnP28653 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BgnP28653 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
BgnP28653 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BgnP28653 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BgnP28653 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
BgnP28653 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
BgnP28653 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BgnP28653 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.83□□□□□ -0.52
BgnP28653 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms