Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 AC101945.2-201ENSMUST00000227886 1377 ntBASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Tnfrsf1aP25118 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Mir686-201ENSMUST00000102174 109 ntBASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Gm11918-201ENSMUST00000121660 179 ntBASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Gm23984-201ENSMUST00000157139 203 ntBASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Gm42929-201ENSMUST00000198374 1286 ntBASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 AC150560.1-201ENSMUST00000227731 1187 ntBASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Gm9115-201ENSMUST00000120192 1348 ntBASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Kcnk16-202ENSMUST00000225596 2127 ntBASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tnfrsf1aP25118 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf1aP25118 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.71□□□□□ -0.69
Tnfrsf1aP25118 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Tnfrsf1aP25118 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Tnfrsf1aP25118 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf1aP25118 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf1aP25118 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf1aP25118 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf1aP25118 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf1aP25118 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC10.71□□□□□ -0.69
Tnfrsf1aP25118 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Tnfrsf1aP25118 Gm9061-201ENSMUST00000182707 1006 ntBASIC10.71□□□□□ -0.69
Tnfrsf1aP25118 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.71□□□□□ -0.69
Tnfrsf1aP25118 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf1aP25118 Ighv8-10-201ENSMUST00000199579 358 ntBASIC10.71□□□□□ -0.69
Tnfrsf1aP25118 Gm44094-201ENSMUST00000204703 2030 ntBASIC10.71□□□□□ -0.69
Tnfrsf1aP25118 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf1aP25118 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC10.71□□□□□ -0.69
Tnfrsf1aP25118 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf1aP25118 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC10.71□□□□□ -0.69
Tnfrsf1aP25118 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf1aP25118 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf1aP25118 AC159006.1-201ENSMUST00000226396 258 ntBASIC10.71□□□□□ -0.69
Tnfrsf1aP25118 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf1aP25118 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf1aP25118 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf1aP25118 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf1aP25118 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms