Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6bP23440 Gm5422-201ENSMUST00000050717 2721 ntBASIC14□□□□□ -0.17
Pde6bP23440 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6bP23440 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6bP23440 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6bP23440 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6bP23440 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6bP23440 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6bP23440 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6bP23440 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pde6bP23440 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Pde6bP23440 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6bP23440 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC14□□□□□ -0.17
Pde6bP23440 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Pde6bP23440 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC14□□□□□ -0.17
Pde6bP23440 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Pde6bP23440 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6bP23440 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14□□□□□ -0.17
Pde6bP23440 Gm4819-201ENSMUST00000182170 1009 ntBASIC14□□□□□ -0.17
Pde6bP23440 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14□□□□□ -0.17
Pde6bP23440 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Pde6bP23440 Gm38297-201ENSMUST00000195122 1057 ntBASIC14□□□□□ -0.17
Pde6bP23440 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC14□□□□□ -0.17
Pde6bP23440 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6bP23440 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14□□□□□ -0.17
Pde6bP23440 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC14□□□□□ -0.17
Pde6bP23440 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6bP23440 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC14□□□□□ -0.17
Pde6bP23440 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14□□□□□ -0.17
Pde6bP23440 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Pde6bP23440 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pde6bP23440 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Pde6bP23440 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Pde6bP23440 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14□□□□□ -0.17
Pde6bP23440 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6bP23440 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Pde6bP23440 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6bP23440 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pde6bP23440 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Pde6bP23440 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Pde6bP23440 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.99□□□□□ -0.17
Pde6bP23440 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6bP23440 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6bP23440 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6bP23440 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6bP23440 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6bP23440 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6bP23440 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6bP23440 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.99□□□□□ -0.17
Pde6bP23440 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6bP23440 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Pde6bP23440 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Pde6bP23440 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.99□□□□□ -0.17
Pde6bP23440 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6bP23440 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6bP23440 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6bP23440 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6bP23440 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.99□□□□□ -0.17
Pde6bP23440 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Pde6bP23440 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6bP23440 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.99□□□□□ -0.17
Pde6bP23440 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6bP23440 Gm26956-201ENSMUST00000182176 986 ntBASIC13.99□□□□□ -0.17
Pde6bP23440 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.99□□□□□ -0.17
Pde6bP23440 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC13.99□□□□□ -0.17
Pde6bP23440 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.99□□□□□ -0.17
Pde6bP23440 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6bP23440 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Pde6bP23440 Gm32025-201ENSMUST00000217960 307 ntBASIC13.99□□□□□ -0.17
Pde6bP23440 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.99□□□□□ -0.17
Pde6bP23440 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC13.99□□□□□ -0.17
Pde6bP23440 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Pde6bP23440 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Pde6bP23440 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6bP23440 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Pde6bP23440 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.99□□□□□ -0.17
Pde6bP23440 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Pde6bP23440 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6bP23440 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6bP23440 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6bP23440 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Pde6bP23440 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6bP23440 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.99□□□□□ -0.17
Pde6bP23440 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6bP23440 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Pde6bP23440 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Pde6bP23440 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6bP23440 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6bP23440 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6bP23440 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6bP23440 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.98□□□□□ -0.17
Pde6bP23440 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6bP23440 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.98□□□□□ -0.17
Pde6bP23440 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6bP23440 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6bP23440 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6bP23440 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.98□□□□□ -0.17
Pde6bP23440 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Pde6bP23440 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6bP23440 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms