Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
P20040 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P20040 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
P20040 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
P20040 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P20040 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P20040 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
P20040 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
P20040 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P20040 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P20040 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P20040 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P20040 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.38□□□□□ -0.59
P20040 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P20040 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.38□□□□□ -0.59
P20040 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P20040 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
P20040 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P20040 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P20040 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
P20040 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P20040 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
P20040 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
P20040 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
P20040 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
P20040 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P20040 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P20040 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.38□□□□□ -0.59
P20040 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P20040 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.38□□□□□ -0.59
P20040 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.38□□□□□ -0.59
P20040 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.38□□□□□ -0.59
P20040 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.38□□□□□ -0.59
P20040 Gm12403-201ENSMUST00000121384 959 ntBASIC11.38□□□□□ -0.59
P20040 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P20040 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P20040 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.38□□□□□ -0.59
P20040 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.38□□□□□ -0.59
P20040 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.38□□□□□ -0.59
P20040 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.38□□□□□ -0.59
P20040 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.38□□□□□ -0.59
P20040 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.38□□□□□ -0.59
P20040 Gm8602-201ENSMUST00000184045 607 ntBASIC11.38□□□□□ -0.59
P20040 Gm43433-201ENSMUST00000196573 481 ntBASIC11.38□□□□□ -0.59
P20040 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P20040 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.38□□□□□ -0.59
P20040 Gm45841-201ENSMUST00000207700 164 ntBASIC11.38□□□□□ -0.59
P20040 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.38□□□□□ -0.59
P20040 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.38□□□□□ -0.59
P20040 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.38□□□□□ -0.59
P20040 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
P20040 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P20040 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P20040 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P20040 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P20040 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
P20040 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P20040 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P20040 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P20040 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P20040 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P20040 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.38□□□□□ -0.59
P20040 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P20040 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P20040 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P20040 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.38□□□□□ -0.59
P20040 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P20040 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
P20040 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P20040 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P20040 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P20040 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.38□□□□□ -0.59
P20040 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P20040 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P20040 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
P20040 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P20040 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P20040 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
P20040 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.38□□□□□ -0.59
P20040 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
P20040 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P20040 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
P20040 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.37□□□□□ -0.59
P20040 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
P20040 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P20040 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.37□□□□□ -0.59
P20040 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.37□□□□□ -0.59
P20040 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P20040 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
P20040 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P20040 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P20040 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.37□□□□□ -0.59
P20040 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P20040 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
P20040 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
P20040 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P20040 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.37□□□□□ -0.59
P20040 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
P20040 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
P20040 Mup-ps23-201ENSMUST00000118063 630 ntBASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms