Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Gm12266-201ENSMUST00000120311 962 ntBASIC11.27□□□□□ -0.61
Ccl3P10855 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.27□□□□□ -0.61
Ccl3P10855 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.27□□□□□ -0.61
Ccl3P10855 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl3P10855 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl3P10855 Mir1943-201ENSMUST00000158276 73 ntBASIC11.27□□□□□ -0.61
Ccl3P10855 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Ccl3P10855 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.27□□□□□ -0.61
Ccl3P10855 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.27□□□□□ -0.61
Ccl3P10855 Gm19187-201ENSMUST00000206781 892 ntBASIC11.27□□□□□ -0.61
Ccl3P10855 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl3P10855 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl3P10855 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl3P10855 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl3P10855 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl3P10855 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.27□□□□□ -0.61
Ccl3P10855 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl3P10855 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl3P10855 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl3P10855 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl3P10855 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl3P10855 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl3P10855 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.27□□□□□ -0.61
Ccl3P10855 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl3P10855 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl3P10855 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl3P10855 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Ccl3P10855 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.27□□□□□ -0.61
Ccl3P10855 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl3P10855 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl3P10855 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl3P10855 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl3P10855 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl3P10855 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl3P10855 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl3P10855 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl3P10855 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl3P10855 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.26□□□□□ -0.61
Ccl3P10855 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Ccl3P10855 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.26□□□□□ -0.61
Ccl3P10855 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl3P10855 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl3P10855 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl3P10855 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.26□□□□□ -0.61
Ccl3P10855 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl3P10855 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl3P10855 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl3P10855 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl3P10855 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Ccl3P10855 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl3P10855 Gm12314-201ENSMUST00000118104 538 ntBASIC11.26□□□□□ -0.61
Ccl3P10855 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl3P10855 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl3P10855 Gm11597-201ENSMUST00000121423 964 ntBASIC11.26□□□□□ -0.61
Ccl3P10855 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.26□□□□□ -0.61
Ccl3P10855 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.26□□□□□ -0.61
Ccl3P10855 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Ccl3P10855 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.26□□□□□ -0.61
Ccl3P10855 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl3P10855 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl3P10855 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.26□□□□□ -0.61
Ccl3P10855 Gm37666-201ENSMUST00000194110 866 ntBASIC11.26□□□□□ -0.61
Ccl3P10855 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.26□□□□□ -0.61
Ccl3P10855 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.26□□□□□ -0.61
Ccl3P10855 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.26□□□□□ -0.61
Ccl3P10855 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.26□□□□□ -0.61
Ccl3P10855 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.26□□□□□ -0.61
Ccl3P10855 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.26□□□□□ -0.61
Ccl3P10855 CT009718.3-201ENSMUST00000221116 367 ntBASIC11.26□□□□□ -0.61
Ccl3P10855 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.26□□□□□ -0.61
Ccl3P10855 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl3P10855 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.26□□□□□ -0.61
Ccl3P10855 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl3P10855 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl3P10855 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl3P10855 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl3P10855 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl3P10855 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl3P10855 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl3P10855 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl3P10855 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl3P10855 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl3P10855 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Ccl3P10855 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl3P10855 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.26□□□□□ -0.61
Ccl3P10855 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl3P10855 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Ccl3P10855 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl3P10855 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Ccl3P10855 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Ccl3P10855 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ccl3P10855 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Ccl3P10855 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl3P10855 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
Ccl3P10855 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl3P10855 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl3P10855 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl3P10855 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl3P10855 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ccl3P10855 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms