Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ifna1P01572 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.8□□□□□ -0.68
Ifna1P01572 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC10.8□□□□□ -0.68
Ifna1P01572 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ifna1P01572 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ifna1P01572 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ifna1P01572 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ifna1P01572 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Ifna1P01572 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Ifna1P01572 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ifna1P01572 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ifna1P01572 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Ifna1P01572 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ifna1P01572 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.8□□□□□ -0.68
Ifna1P01572 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.8□□□□□ -0.68
Ifna1P01572 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ifna1P01572 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ifna1P01572 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ifna1P01572 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ifna1P01572 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ifna1P01572 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ifna1P01572 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ifna1P01572 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ifna1P01572 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.8□□□□□ -0.68
Ifna1P01572 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Ifna1P01572 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC10.8□□□□□ -0.68
Ifna1P01572 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ifna1P01572 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ifna1P01572 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.8□□□□□ -0.68
Ifna1P01572 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Ifna1P01572 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ifna1P01572 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Ifna1P01572 Gm37105-201ENSMUST00000192251 2085 ntBASIC10.8□□□□□ -0.68
Ifna1P01572 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ifna1P01572 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ifna1P01572 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ifna1P01572 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ifna1P01572 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.79□□□□□ -0.68
Ifna1P01572 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ifna1P01572 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ifna1P01572 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ifna1P01572 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ifna1P01572 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ifna1P01572 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Ifna1P01572 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ifna1P01572 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ifna1P01572 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Ifna1P01572 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ifna1P01572 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ifna1P01572 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC10.79□□□□□ -0.68
Ifna1P01572 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ifna1P01572 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC10.79□□□□□ -0.68
Ifna1P01572 Gm13223-201ENSMUST00000118609 747 ntBASIC10.79□□□□□ -0.68
Ifna1P01572 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC10.79□□□□□ -0.68
Ifna1P01572 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Ifna1P01572 Gm26308-201ENSMUST00000157768 69 ntBASIC10.79□□□□□ -0.68
Ifna1P01572 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC10.79□□□□□ -0.68
Ifna1P01572 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC10.79□□□□□ -0.68
Ifna1P01572 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ifna1P01572 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Ifna1P01572 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Ifna1P01572 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ifna1P01572 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Ifna1P01572 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ifna1P01572 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ifna1P01572 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ifna1P01572 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ifna1P01572 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.79□□□□□ -0.68
Ifna1P01572 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ifna1P01572 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.79□□□□□ -0.68
Ifna1P01572 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ifna1P01572 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.79□□□□□ -0.68
Ifna1P01572 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ifna1P01572 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ifna1P01572 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ifna1P01572 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ifna1P01572 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
Ifna1P01572 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ifna1P01572 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ifna1P01572 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.78□□□□□ -0.68
Ifna1P01572 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ifna1P01572 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ifna1P01572 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.78□□□□□ -0.68
Ifna1P01572 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.78□□□□□ -0.68
Ifna1P01572 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC10.78□□□□□ -0.68
Ifna1P01572 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ifna1P01572 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ifna1P01572 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ifna1P01572 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ifna1P01572 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ifna1P01572 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ifna1P01572 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.78□□□□□ -0.68
Ifna1P01572 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ifna1P01572 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ifna1P01572 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ifna1P01572 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.78□□□□□ -0.68
Ifna1P01572 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ifna1P01572 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ifna1P01572 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ifna1P01572 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms