Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Vti1aO89116 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Vti1aO89116 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vti1aO89116 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Vti1aO89116 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.83□□□□□ -0.2
Vti1aO89116 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.83□□□□□ -0.2
Vti1aO89116 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Vti1aO89116 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vti1aO89116 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vti1aO89116 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vti1aO89116 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Vti1aO89116 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vti1aO89116 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Vti1aO89116 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.83□□□□□ -0.2
Vti1aO89116 Gm13323-201ENSMUST00000120245 1151 ntBASIC13.83□□□□□ -0.2
Vti1aO89116 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.83□□□□□ -0.2
Vti1aO89116 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.83□□□□□ -0.2
Vti1aO89116 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC13.83□□□□□ -0.2
Vti1aO89116 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.83□□□□□ -0.2
Vti1aO89116 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.83□□□□□ -0.2
Vti1aO89116 Gm28693-202ENSMUST00000190758 331 ntBASIC13.83□□□□□ -0.2
Vti1aO89116 Gm37259-201ENSMUST00000193903 849 ntBASIC13.83□□□□□ -0.2
Vti1aO89116 Gm19931-201ENSMUST00000198920 368 ntBASIC13.83□□□□□ -0.2
Vti1aO89116 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.83□□□□□ -0.2
Vti1aO89116 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.83□□□□□ -0.2
Vti1aO89116 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vti1aO89116 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vti1aO89116 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.83□□□□□ -0.2
Vti1aO89116 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vti1aO89116 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Vti1aO89116 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Vti1aO89116 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Vti1aO89116 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vti1aO89116 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Vti1aO89116 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Vti1aO89116 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vti1aO89116 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.83□□□□□ -0.2
Vti1aO89116 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Vti1aO89116 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vti1aO89116 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.83□□□□□ -0.2
Vti1aO89116 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vti1aO89116 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.83□□□□□ -0.2
Vti1aO89116 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vti1aO89116 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vti1aO89116 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Vti1aO89116 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Vti1aO89116 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.83□□□□□ -0.2
Vti1aO89116 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Vti1aO89116 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1aO89116 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1aO89116 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1aO89116 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Vti1aO89116 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1aO89116 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1aO89116 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1aO89116 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1aO89116 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Vti1aO89116 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Vti1aO89116 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.82□□□□□ -0.2
Vti1aO89116 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1aO89116 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1aO89116 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1aO89116 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1aO89116 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.82□□□□□ -0.2
Vti1aO89116 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Vti1aO89116 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1aO89116 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1aO89116 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1aO89116 Gm12502-201ENSMUST00000120197 444 ntBASIC13.82□□□□□ -0.2
Vti1aO89116 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.82□□□□□ -0.2
Vti1aO89116 Gm4819-201ENSMUST00000182170 1009 ntBASIC13.82□□□□□ -0.2
Vti1aO89116 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.82□□□□□ -0.2
Vti1aO89116 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1aO89116 Gm5781-201ENSMUST00000219792 443 ntBASIC13.82□□□□□ -0.2
Vti1aO89116 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1aO89116 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1aO89116 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1aO89116 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1aO89116 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1aO89116 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1aO89116 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1aO89116 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1aO89116 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1aO89116 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1aO89116 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Vti1aO89116 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Vti1aO89116 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1aO89116 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1aO89116 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.81□□□□□ -0.2
Vti1aO89116 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1aO89116 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.81□□□□□ -0.2
Vti1aO89116 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1aO89116 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1aO89116 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.81□□□□□ -0.2
Vti1aO89116 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1aO89116 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1aO89116 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1aO89116 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1aO89116 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1aO89116 Gm10434-201ENSMUST00000101158 471 ntBASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms