Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smarce1O54941 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarce1O54941 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarce1O54941 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC15.21■□□□□ 0.03
Smarce1O54941 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarce1O54941 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smarce1O54941 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC15.21■□□□□ 0.03
Smarce1O54941 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC15.21■□□□□ 0.03
Smarce1O54941 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smarce1O54941 AC169036.1-201ENSMUST00000227994 296 ntBASIC15.21■□□□□ 0.03
Smarce1O54941 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarce1O54941 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarce1O54941 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarce1O54941 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Smarce1O54941 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Smarce1O54941 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Smarce1O54941 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Smarce1O54941 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smarce1O54941 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarce1O54941 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarce1O54941 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarce1O54941 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smarce1O54941 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarce1O54941 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Smarce1O54941 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smarce1O54941 Gm18263-201ENSMUST00000220846 1928 ntBASIC15.2■□□□□ 0.02
Smarce1O54941 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarce1O54941 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC15.2■□□□□ 0.02
Smarce1O54941 Gm14921-201ENSMUST00000118643 908 ntBASIC15.2■□□□□ 0.02
Smarce1O54941 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC15.2■□□□□ 0.02
Smarce1O54941 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Smarce1O54941 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarce1O54941 Gm37472-201ENSMUST00000192342 4052 ntBASIC15.2■□□□□ 0.02
Smarce1O54941 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC15.2■□□□□ 0.02
Smarce1O54941 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarce1O54941 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC15.2■□□□□ 0.02
Smarce1O54941 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smarce1O54941 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarce1O54941 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Smarce1O54941 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Smarce1O54941 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarce1O54941 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarce1O54941 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarce1O54941 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarce1O54941 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarce1O54941 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarce1O54941 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Smarce1O54941 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smarce1O54941 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarce1O54941 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarce1O54941 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC15.19■□□□□ 0.02
Smarce1O54941 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarce1O54941 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarce1O54941 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarce1O54941 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarce1O54941 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarce1O54941 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smarce1O54941 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarce1O54941 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Smarce1O54941 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smarce1O54941 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Smarce1O54941 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.19■□□□□ 0.02
Smarce1O54941 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smarce1O54941 Gm9630-201ENSMUST00000178304 885 ntBASIC15.19■□□□□ 0.02
Smarce1O54941 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC15.19■□□□□ 0.02
Smarce1O54941 Gm15823-201ENSMUST00000064305 670 ntBASIC15.19■□□□□ 0.02
Smarce1O54941 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarce1O54941 Gm7049-201ENSMUST00000223520 1712 ntBASIC15.19■□□□□ 0.02
Smarce1O54941 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarce1O54941 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarce1O54941 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarce1O54941 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarce1O54941 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC15.19■□□□□ 0.02
Smarce1O54941 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC15.19■□□□□ 0.02
Smarce1O54941 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarce1O54941 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Smarce1O54941 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarce1O54941 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Smarce1O54941 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smarce1O54941 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC15.18■□□□□ 0.02
Smarce1O54941 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarce1O54941 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarce1O54941 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarce1O54941 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smarce1O54941 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC15.18■□□□□ 0.02
Smarce1O54941 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarce1O54941 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarce1O54941 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarce1O54941 Gm12928-201ENSMUST00000117115 573 ntBASIC15.18■□□□□ 0.02
Smarce1O54941 Gm11618-201ENSMUST00000117946 267 ntBASIC15.18■□□□□ 0.02
Smarce1O54941 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Smarce1O54941 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarce1O54941 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarce1O54941 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarce1O54941 Gm26035-201ENSMUST00000083065 308 ntBASIC15.18■□□□□ 0.02
Smarce1O54941 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarce1O54941 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarce1O54941 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarce1O54941 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarce1O54941 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms