Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
ChkaO54804 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.94□□□□□ -0.34
ChkaO54804 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ChkaO54804 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.93□□□□□ -0.34
ChkaO54804 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ChkaO54804 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ChkaO54804 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ChkaO54804 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
ChkaO54804 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ChkaO54804 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ChkaO54804 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ChkaO54804 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ChkaO54804 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ChkaO54804 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ChkaO54804 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.93□□□□□ -0.34
ChkaO54804 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ChkaO54804 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
ChkaO54804 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ChkaO54804 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ChkaO54804 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ChkaO54804 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
ChkaO54804 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.93□□□□□ -0.34
ChkaO54804 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ChkaO54804 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ChkaO54804 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
ChkaO54804 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.93□□□□□ -0.34
ChkaO54804 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ChkaO54804 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ChkaO54804 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.93□□□□□ -0.34
ChkaO54804 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.93□□□□□ -0.34
ChkaO54804 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ChkaO54804 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ChkaO54804 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ChkaO54804 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ChkaO54804 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ChkaO54804 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ChkaO54804 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ChkaO54804 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ChkaO54804 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ChkaO54804 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ChkaO54804 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ChkaO54804 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.92□□□□□ -0.34
ChkaO54804 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ChkaO54804 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ChkaO54804 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ChkaO54804 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ChkaO54804 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
ChkaO54804 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
ChkaO54804 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.92□□□□□ -0.34
ChkaO54804 Gm14704-201ENSMUST00000120300 874 ntBASIC12.92□□□□□ -0.34
ChkaO54804 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ChkaO54804 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.92□□□□□ -0.34
ChkaO54804 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
ChkaO54804 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ChkaO54804 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.92□□□□□ -0.34
ChkaO54804 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ChkaO54804 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ChkaO54804 Gm6745-201ENSMUST00000199216 526 ntBASIC12.92□□□□□ -0.34
ChkaO54804 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.92□□□□□ -0.34
ChkaO54804 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
ChkaO54804 Gm7287-201ENSMUST00000205267 602 ntBASIC12.92□□□□□ -0.34
ChkaO54804 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.92□□□□□ -0.34
ChkaO54804 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
ChkaO54804 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.92□□□□□ -0.34
ChkaO54804 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ChkaO54804 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ChkaO54804 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
ChkaO54804 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
ChkaO54804 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ChkaO54804 Mir339-201ENSMUST00000083659 96 ntBASIC12.92□□□□□ -0.34
ChkaO54804 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ChkaO54804 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ChkaO54804 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ChkaO54804 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
ChkaO54804 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ChkaO54804 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ChkaO54804 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ChkaO54804 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
ChkaO54804 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ChkaO54804 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ChkaO54804 Matn2-203ENSMUST00000226766 3252 ntBASIC12.92□□□□□ -0.34
ChkaO54804 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
ChkaO54804 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ChkaO54804 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ChkaO54804 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
ChkaO54804 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
ChkaO54804 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
ChkaO54804 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
ChkaO54804 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ChkaO54804 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
ChkaO54804 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.92□□□□□ -0.34
ChkaO54804 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ChkaO54804 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.91□□□□□ -0.34
ChkaO54804 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
ChkaO54804 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.91□□□□□ -0.34
ChkaO54804 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ChkaO54804 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ChkaO54804 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.91□□□□□ -0.34
ChkaO54804 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.91□□□□□ -0.34
ChkaO54804 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms