Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sdc4O35988 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc4O35988 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc4O35988 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc4O35988 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Sdc4O35988 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc4O35988 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.18□□□□□ -0.3
Sdc4O35988 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc4O35988 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc4O35988 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc4O35988 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc4O35988 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Sdc4O35988 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.18□□□□□ -0.3
Sdc4O35988 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc4O35988 Gm24255-201ENSMUST00000104481 128 ntBASIC13.18□□□□□ -0.3
Sdc4O35988 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc4O35988 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Sdc4O35988 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc4O35988 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.18□□□□□ -0.3
Sdc4O35988 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.18□□□□□ -0.3
Sdc4O35988 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.18□□□□□ -0.3
Sdc4O35988 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc4O35988 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Sdc4O35988 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.18□□□□□ -0.3
Sdc4O35988 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc4O35988 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc4O35988 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc4O35988 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.18□□□□□ -0.3
Sdc4O35988 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc4O35988 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc4O35988 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.18□□□□□ -0.3
Sdc4O35988 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.18□□□□□ -0.3
Sdc4O35988 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.18□□□□□ -0.3
Sdc4O35988 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Sdc4O35988 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc4O35988 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sdc4O35988 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc4O35988 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc4O35988 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc4O35988 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc4O35988 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc4O35988 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc4O35988 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc4O35988 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc4O35988 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc4O35988 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sdc4O35988 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Sdc4O35988 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc4O35988 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc4O35988 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Sdc4O35988 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Sdc4O35988 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc4O35988 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.17□□□□□ -0.3
Sdc4O35988 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc4O35988 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.17□□□□□ -0.3
Sdc4O35988 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc4O35988 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.17□□□□□ -0.3
Sdc4O35988 Gm26083-201ENSMUST00000157904 193 ntBASIC13.17□□□□□ -0.3
Sdc4O35988 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc4O35988 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Sdc4O35988 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.17□□□□□ -0.3
Sdc4O35988 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.17□□□□□ -0.3
Sdc4O35988 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.17□□□□□ -0.3
Sdc4O35988 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc4O35988 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Sdc4O35988 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc4O35988 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc4O35988 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc4O35988 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Sdc4O35988 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Sdc4O35988 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc4O35988 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.17□□□□□ -0.3
Sdc4O35988 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sdc4O35988 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc4O35988 Daam2-202ENSMUST00000224595 1926 ntBASIC13.17□□□□□ -0.3
Sdc4O35988 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc4O35988 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.17□□□□□ -0.3
Sdc4O35988 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.17□□□□□ -0.3
Sdc4O35988 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc4O35988 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc4O35988 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sdc4O35988 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sdc4O35988 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sdc4O35988 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sdc4O35988 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sdc4O35988 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sdc4O35988 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Sdc4O35988 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sdc4O35988 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sdc4O35988 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sdc4O35988 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Sdc4O35988 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sdc4O35988 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Sdc4O35988 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sdc4O35988 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.16□□□□□ -0.3
Sdc4O35988 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Sdc4O35988 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sdc4O35988 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Sdc4O35988 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sdc4O35988 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms