Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Npc1O35604 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Npc1O35604 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.51□□□□□ -0.41
Npc1O35604 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.51□□□□□ -0.41
Npc1O35604 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.51□□□□□ -0.41
Npc1O35604 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.51□□□□□ -0.41
Npc1O35604 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Npc1O35604 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Npc1O35604 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Npc1O35604 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Npc1O35604 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Npc1O35604 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Npc1O35604 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.51□□□□□ -0.41
Npc1O35604 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Npc1O35604 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Npc1O35604 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.51□□□□□ -0.41
Npc1O35604 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Npc1O35604 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Npc1O35604 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Npc1O35604 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Npc1O35604 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Npc1O35604 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Npc1O35604 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Npc1O35604 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.51□□□□□ -0.41
Npc1O35604 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Npc1O35604 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Npc1O35604 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Npc1O35604 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Npc1O35604 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Npc1O35604 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Npc1O35604 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Npc1O35604 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.5□□□□□ -0.41
Npc1O35604 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.5□□□□□ -0.41
Npc1O35604 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Npc1O35604 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Npc1O35604 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Npc1O35604 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Npc1O35604 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Npc1O35604 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Npc1O35604 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.5□□□□□ -0.41
Npc1O35604 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.5□□□□□ -0.41
Npc1O35604 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.5□□□□□ -0.41
Npc1O35604 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Npc1O35604 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.5□□□□□ -0.41
Npc1O35604 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.5□□□□□ -0.41
Npc1O35604 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Npc1O35604 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.5□□□□□ -0.41
Npc1O35604 Gm38002-201ENSMUST00000193255 180 ntBASIC12.5□□□□□ -0.41
Npc1O35604 Gm8099-201ENSMUST00000200510 742 ntBASIC12.5□□□□□ -0.41
Npc1O35604 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.5□□□□□ -0.41
Npc1O35604 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Npc1O35604 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Npc1O35604 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Npc1O35604 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Npc1O35604 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Npc1O35604 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.5□□□□□ -0.41
Npc1O35604 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Npc1O35604 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Npc1O35604 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Npc1O35604 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Npc1O35604 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.5□□□□□ -0.41
Npc1O35604 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Npc1O35604 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Npc1O35604 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.5□□□□□ -0.41
Npc1O35604 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.5□□□□□ -0.41
Npc1O35604 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Npc1O35604 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Npc1O35604 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Npc1O35604 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Npc1O35604 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Npc1O35604 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Npc1O35604 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Npc1O35604 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Npc1O35604 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Npc1O35604 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Npc1O35604 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Npc1O35604 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Npc1O35604 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Npc1O35604 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.49□□□□□ -0.41
Npc1O35604 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.49□□□□□ -0.41
Npc1O35604 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.49□□□□□ -0.41
Npc1O35604 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.49□□□□□ -0.41
Npc1O35604 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.49□□□□□ -0.41
Npc1O35604 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Npc1O35604 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Npc1O35604 Gm27572-201ENSMUST00000183702 255 ntBASIC12.49□□□□□ -0.41
Npc1O35604 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.49□□□□□ -0.41
Npc1O35604 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Npc1O35604 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
Npc1O35604 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Npc1O35604 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Npc1O35604 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Npc1O35604 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Npc1O35604 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Npc1O35604 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.49□□□□□ -0.41
Npc1O35604 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Npc1O35604 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Npc1O35604 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Npc1O35604 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Npc1O35604 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms