Protein–RNA interactions for Protein: O35452

Tnxb, Tenascin X, mousemouse

Predictions only

Length 4,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnxbO35452 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
TnxbO35452 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
TnxbO35452 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC8.9□□□□□ -0.98
TnxbO35452 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
TnxbO35452 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
TnxbO35452 AC154725.1-201ENSMUST00000224826 1961 ntBASIC8.9□□□□□ -0.98
TnxbO35452 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
TnxbO35452 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
TnxbO35452 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
TnxbO35452 Gm45504-201ENSMUST00000211407 2107 ntBASIC8.9□□□□□ -0.98
TnxbO35452 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC8.9□□□□□ -0.98
TnxbO35452 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
TnxbO35452 Mrps23-202ENSMUST00000107915 332 ntTSL 5 BASIC8.9□□□□□ -0.99
TnxbO35452 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.99
TnxbO35452 Gm14270-201ENSMUST00000118388 846 ntBASIC8.9□□□□□ -0.99
TnxbO35452 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC8.9□□□□□ -0.99
TnxbO35452 Gm26313-201ENSMUST00000157770 308 ntBASIC8.9□□□□□ -0.99
TnxbO35452 Gm8197-202ENSMUST00000193422 934 ntBASIC8.9□□□□□ -0.99
TnxbO35452 AC124613.1-201ENSMUST00000198711 88 ntBASIC8.9□□□□□ -0.99
TnxbO35452 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC8.9□□□□□ -0.99
TnxbO35452 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.99
TnxbO35452 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC8.9□□□□□ -0.99
TnxbO35452 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC8.9□□□□□ -0.99
TnxbO35452 Sgca-201ENSMUST00000100551 1465 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
TnxbO35452 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
TnxbO35452 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
TnxbO35452 AC159649.2-201ENSMUST00000222984 3223 ntBASIC8.9□□□□□ -0.99
TnxbO35452 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
TnxbO35452 Gm9673-201ENSMUST00000119287 781 ntBASIC8.89□□□□□ -0.99
TnxbO35452 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC8.89□□□□□ -0.99
TnxbO35452 Gm30052-201ENSMUST00000211951 913 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC8.89□□□□□ -0.99
TnxbO35452 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC8.89□□□□□ -0.99
TnxbO35452 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC8.89□□□□□ -0.99
TnxbO35452 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC8.89□□□□□ -0.99
TnxbO35452 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 AC154671.1-201ENSMUST00000228617 1578 ntBASIC8.89□□□□□ -0.99
TnxbO35452 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC8.89□□□□□ -0.99
TnxbO35452 AC174797.1-201ENSMUST00000224339 1649 ntBASIC8.89□□□□□ -0.99
TnxbO35452 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Gm43548-201ENSMUST00000197139 2353 ntBASIC8.89□□□□□ -0.99
TnxbO35452 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
TnxbO35452 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC8.89□□□□□ -0.99
TnxbO35452 Gm12976-201ENSMUST00000150171 459 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Gm37638-201ENSMUST00000194337 1123 ntBASIC8.89□□□□□ -0.99
TnxbO35452 Rps25-205ENSMUST00000216867 577 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC8.89□□□□□ -0.99
TnxbO35452 Gm5451-201ENSMUST00000080545 579 ntBASIC8.89□□□□□ -0.99
TnxbO35452 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC8.89□□□□□ -0.99
TnxbO35452 Gm5431-201ENSMUST00000109209 1701 ntTSL 5 BASIC8.89□□□□□ -0.99
TnxbO35452 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Gm14942-201ENSMUST00000119642 336 ntBASIC8.89□□□□□ -0.99
TnxbO35452 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC8.89□□□□□ -0.99
TnxbO35452 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC8.89□□□□□ -0.99
TnxbO35452 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
TnxbO35452 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
TnxbO35452 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC8.89□□□□□ -0.99
TnxbO35452 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
TnxbO35452 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC8.89□□□□□ -0.99
TnxbO35452 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC8.89□□□□□ -0.99
TnxbO35452 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
TnxbO35452 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC8.89□□□□□ -0.99
TnxbO35452 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
TnxbO35452 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms