Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf3O08791 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf3O08791 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf3O08791 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf3O08791 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf3O08791 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf3O08791 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf3O08791 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf3O08791 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ebf3O08791 Gm12502-201ENSMUST00000120197 444 ntBASIC13.31□□□□□ -0.28
Ebf3O08791 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.31□□□□□ -0.28
Ebf3O08791 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf3O08791 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.31□□□□□ -0.28
Ebf3O08791 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.31□□□□□ -0.28
Ebf3O08791 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Ebf3O08791 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.31□□□□□ -0.28
Ebf3O08791 Mettl6-204ENSMUST00000227595 1027 ntBASIC13.31□□□□□ -0.28
Ebf3O08791 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf3O08791 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf3O08791 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.31□□□□□ -0.28
Ebf3O08791 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf3O08791 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf3O08791 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf3O08791 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf3O08791 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.31□□□□□ -0.28
Ebf3O08791 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf3O08791 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ebf3O08791 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf3O08791 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ebf3O08791 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.3□□□□□ -0.28
Ebf3O08791 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf3O08791 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf3O08791 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ebf3O08791 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf3O08791 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf3O08791 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Ebf3O08791 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf3O08791 Gm10434-201ENSMUST00000101158 471 ntBASIC13.3□□□□□ -0.28
Ebf3O08791 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf3O08791 Gm11222-201ENSMUST00000119005 738 ntBASIC13.3□□□□□ -0.28
Ebf3O08791 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.3□□□□□ -0.28
Ebf3O08791 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf3O08791 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf3O08791 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf3O08791 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Ebf3O08791 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf3O08791 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf3O08791 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.3□□□□□ -0.28
Ebf3O08791 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf3O08791 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.3□□□□□ -0.28
Ebf3O08791 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.3□□□□□ -0.28
Ebf3O08791 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf3O08791 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf3O08791 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf3O08791 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf3O08791 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf3O08791 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf3O08791 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf3O08791 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf3O08791 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf3O08791 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ebf3O08791 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.29□□□□□ -0.28
Ebf3O08791 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ebf3O08791 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ebf3O08791 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ebf3O08791 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ebf3O08791 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ebf3O08791 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ebf3O08791 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ebf3O08791 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ebf3O08791 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ebf3O08791 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Ebf3O08791 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ebf3O08791 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ebf3O08791 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ebf3O08791 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ebf3O08791 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ebf3O08791 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ebf3O08791 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.29□□□□□ -0.28
Ebf3O08791 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.29□□□□□ -0.28
Ebf3O08791 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.29□□□□□ -0.28
Ebf3O08791 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ebf3O08791 Mir5132-201ENSMUST00000175166 71 ntBASIC13.29□□□□□ -0.28
Ebf3O08791 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ebf3O08791 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.29□□□□□ -0.28
Ebf3O08791 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC13.29□□□□□ -0.28
Ebf3O08791 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ebf3O08791 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.29□□□□□ -0.28
Ebf3O08791 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.29□□□□□ -0.28
Ebf3O08791 Gm32025-201ENSMUST00000217960 307 ntBASIC13.29□□□□□ -0.28
Ebf3O08791 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ebf3O08791 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ebf3O08791 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.29□□□□□ -0.28
Ebf3O08791 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ebf3O08791 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.29□□□□□ -0.28
Ebf3O08791 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ebf3O08791 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ebf3O08791 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Ebf3O08791 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.29□□□□□ -0.28
Ebf3O08791 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms