Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim55G3X8Y1 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.13□□□□□ -0.31
Trim55G3X8Y1 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.13□□□□□ -0.31
Trim55G3X8Y1 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.13□□□□□ -0.31
Trim55G3X8Y1 Gm15483-201ENSMUST00000120338 456 ntBASIC13.13□□□□□ -0.31
Trim55G3X8Y1 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.13□□□□□ -0.31
Trim55G3X8Y1 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC13.13□□□□□ -0.31
Trim55G3X8Y1 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trim55G3X8Y1 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim55G3X8Y1 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim55G3X8Y1 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim55G3X8Y1 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim55G3X8Y1 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim55G3X8Y1 Gm44913-201ENSMUST00000208060 2990 ntBASIC13.12□□□□□ -0.31
Trim55G3X8Y1 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim55G3X8Y1 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim55G3X8Y1 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim55G3X8Y1 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.12□□□□□ -0.31
Trim55G3X8Y1 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim55G3X8Y1 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim55G3X8Y1 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim55G3X8Y1 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim55G3X8Y1 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim55G3X8Y1 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim55G3X8Y1 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim55G3X8Y1 Gm26308-201ENSMUST00000157768 69 ntBASIC13.12□□□□□ -0.31
Trim55G3X8Y1 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.12□□□□□ -0.31
Trim55G3X8Y1 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trim55G3X8Y1 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim55G3X8Y1 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim55G3X8Y1 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim55G3X8Y1 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim55G3X8Y1 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.12□□□□□ -0.31
Trim55G3X8Y1 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim55G3X8Y1 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim55G3X8Y1 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim55G3X8Y1 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim55G3X8Y1 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim55G3X8Y1 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim55G3X8Y1 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC13.12□□□□□ -0.31
Trim55G3X8Y1 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim55G3X8Y1 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim55G3X8Y1 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim55G3X8Y1 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim55G3X8Y1 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trim55G3X8Y1 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trim55G3X8Y1 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.11□□□□□ -0.31
Trim55G3X8Y1 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim55G3X8Y1 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim55G3X8Y1 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trim55G3X8Y1 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms