Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh9F8VPK8 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh9F8VPK8 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh9F8VPK8 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh9F8VPK8 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh9F8VPK8 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh9F8VPK8 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh9F8VPK8 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Pcdh9F8VPK8 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh9F8VPK8 Gm13612-201ENSMUST00000119276 390 ntBASIC13.11□□□□□ -0.31
Pcdh9F8VPK8 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.11□□□□□ -0.31
Pcdh9F8VPK8 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh9F8VPK8 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh9F8VPK8 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh9F8VPK8 Gm8598-201ENSMUST00000221184 836 ntBASIC13.11□□□□□ -0.31
Pcdh9F8VPK8 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh9F8VPK8 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh9F8VPK8 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh9F8VPK8 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh9F8VPK8 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdh9F8VPK8 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Pcdh9F8VPK8 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh9F8VPK8 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh9F8VPK8 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.11□□□□□ -0.31
Pcdh9F8VPK8 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh9F8VPK8 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdh9F8VPK8 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh9F8VPK8 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh9F8VPK8 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdh9F8VPK8 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.11□□□□□ -0.31
Pcdh9F8VPK8 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdh9F8VPK8 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh9F8VPK8 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdh9F8VPK8 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh9F8VPK8 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Gm13123-201ENSMUST00000122173 492 ntBASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdh9F8VPK8 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Gm12490-201ENSMUST00000120255 560 ntBASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Gm14704-201ENSMUST00000120300 874 ntBASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Gm12138-201ENSMUST00000122180 951 ntBASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh9F8VPK8 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms