Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC17.68■□□□□ 0.42
Hfm1D3Z4R1 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hfm1D3Z4R1 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hfm1D3Z4R1 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC17.68■□□□□ 0.42
Hfm1D3Z4R1 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Hfm1D3Z4R1 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hfm1D3Z4R1 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hfm1D3Z4R1 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hfm1D3Z4R1 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hfm1D3Z4R1 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hfm1D3Z4R1 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hfm1D3Z4R1 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hfm1D3Z4R1 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hfm1D3Z4R1 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC17.67■□□□□ 0.42
Hfm1D3Z4R1 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hfm1D3Z4R1 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hfm1D3Z4R1 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hfm1D3Z4R1 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hfm1D3Z4R1 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hfm1D3Z4R1 Gm11451-201ENSMUST00000118946 630 ntBASIC17.67■□□□□ 0.42
Hfm1D3Z4R1 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hfm1D3Z4R1 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hfm1D3Z4R1 AC124457.1-201ENSMUST00000198845 120 ntBASIC17.67■□□□□ 0.42
Hfm1D3Z4R1 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hfm1D3Z4R1 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hfm1D3Z4R1 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hfm1D3Z4R1 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Hfm1D3Z4R1 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC17.67■□□□□ 0.42
Hfm1D3Z4R1 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Hfm1D3Z4R1 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Hfm1D3Z4R1 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hfm1D3Z4R1 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hfm1D3Z4R1 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hfm1D3Z4R1 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hfm1D3Z4R1 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hfm1D3Z4R1 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hfm1D3Z4R1 Gm14585-201ENSMUST00000120713 634 ntBASIC17.66■□□□□ 0.42
Hfm1D3Z4R1 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Hfm1D3Z4R1 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hfm1D3Z4R1 Gm25072-201ENSMUST00000175233 235 ntBASIC17.66■□□□□ 0.42
Hfm1D3Z4R1 Gm23771-201ENSMUST00000178702 110 ntBASIC17.66■□□□□ 0.42
Hfm1D3Z4R1 Gm3671-201ENSMUST00000182463 1007 ntBASIC17.66■□□□□ 0.42
Hfm1D3Z4R1 Mir6998-201ENSMUST00000183343 64 ntBASIC17.66■□□□□ 0.42
Hfm1D3Z4R1 Mir8115-201ENSMUST00000184992 119 ntBASIC17.66■□□□□ 0.42
Hfm1D3Z4R1 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC17.66■□□□□ 0.42
Hfm1D3Z4R1 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hfm1D3Z4R1 Gm10371-202ENSMUST00000228010 1081 ntBASIC17.66■□□□□ 0.42
Hfm1D3Z4R1 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Hfm1D3Z4R1 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hfm1D3Z4R1 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hfm1D3Z4R1 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC17.66■□□□□ 0.42
Hfm1D3Z4R1 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hfm1D3Z4R1 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC17.66■□□□□ 0.42
Hfm1D3Z4R1 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Hfm1D3Z4R1 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Hfm1D3Z4R1 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hfm1D3Z4R1 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hfm1D3Z4R1 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hfm1D3Z4R1 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
Hfm1D3Z4R1 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hfm1D3Z4R1 Gm11340-201ENSMUST00000119226 412 ntBASIC17.65■□□□□ 0.42
Hfm1D3Z4R1 Gm4726-201ENSMUST00000135604 736 ntBASIC17.65■□□□□ 0.42
Hfm1D3Z4R1 Gm6019-201ENSMUST00000148369 736 ntBASIC17.65■□□□□ 0.42
Hfm1D3Z4R1 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hfm1D3Z4R1 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC17.65■□□□□ 0.42
Hfm1D3Z4R1 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC17.65■□□□□ 0.42
Hfm1D3Z4R1 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hfm1D3Z4R1 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Hfm1D3Z4R1 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hfm1D3Z4R1 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hfm1D3Z4R1 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hfm1D3Z4R1 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Hfm1D3Z4R1 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Hfm1D3Z4R1 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hfm1D3Z4R1 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC17.65■□□□□ 0.42
Hfm1D3Z4R1 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hfm1D3Z4R1 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hfm1D3Z4R1 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Hfm1D3Z4R1 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Hfm1D3Z4R1 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC17.64■□□□□ 0.42
Hfm1D3Z4R1 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Hfm1D3Z4R1 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
Hfm1D3Z4R1 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC17.64■□□□□ 0.42
Hfm1D3Z4R1 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC17.64■□□□□ 0.42
Hfm1D3Z4R1 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC17.64■□□□□ 0.42
Hfm1D3Z4R1 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
Hfm1D3Z4R1 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Hfm1D3Z4R1 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Hfm1D3Z4R1 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC17.64■□□□□ 0.42
Hfm1D3Z4R1 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Hfm1D3Z4R1 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC17.64■□□□□ 0.42
Hfm1D3Z4R1 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Hfm1D3Z4R1 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hfm1D3Z4R1 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hfm1D3Z4R1 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Hfm1D3Z4R1 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hfm1D3Z4R1 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hfm1D3Z4R1 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hfm1D3Z4R1 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hfm1D3Z4R1 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms