Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
H2afb2S4R1M3 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb2S4R1M3 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb2S4R1M3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb2S4R1M3 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb2S4R1M3 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb2S4R1M3 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb2S4R1M3 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2afb2S4R1M3 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Gm14921-201ENSMUST00000118643 908 ntBASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Gm4271-201ENSMUST00000174444 973 ntBASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Gm29649-201ENSMUST00000185649 419 ntBASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Gm7561-201ENSMUST00000211203 886 ntBASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Gm6091-201ENSMUST00000098307 165 ntBASIC12.82□□□□□ -0.36
H2afb2S4R1M3 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H2afb2S4R1M3 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Gm23363-201ENSMUST00000175024 79 ntBASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Gm8099-201ENSMUST00000200510 742 ntBASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H2afb2S4R1M3 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
H2afb2S4R1M3 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms