Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cx3cr1Q9Z0D9 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm13453-201ENSMUST00000118708 357 ntBASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm14822-201ENSMUST00000122247 291 ntBASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm19078-201ENSMUST00000206311 727 ntBASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 AW822252-206ENSMUST00000208904 237 ntBASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 AC165157.4-201ENSMUST00000220587 139 ntBASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 AC139580.1-202ENSMUST00000223574 928 ntBASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Cx3cr1Q9Z0D9 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm17837-201ENSMUST00000186435 985 ntBASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm38294-201ENSMUST00000192831 381 ntBASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm42550-201ENSMUST00000201553 960 ntBASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm7775-201ENSMUST00000218871 853 ntBASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 AC124732.2-201ENSMUST00000221977 316 ntBASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Rn7sk-201ENSMUST00000083103 331 ntBASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm26315-201ENSMUST00000083890 321 ntBASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm45684-201ENSMUST00000210244 1571 ntBASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cx3cr1Q9Z0D9 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms