Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh17Q9R100 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Cdh17Q9R100 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh17Q9R100 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh17Q9R100 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.48□□□□□ -0.41
Cdh17Q9R100 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.48□□□□□ -0.41
Cdh17Q9R100 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh17Q9R100 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh17Q9R100 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh17Q9R100 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Cdh17Q9R100 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh17Q9R100 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cdh17Q9R100 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh17Q9R100 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh17Q9R100 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh17Q9R100 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh17Q9R100 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh17Q9R100 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.48□□□□□ -0.41
Cdh17Q9R100 Gm8213-201ENSMUST00000118191 441 ntBASIC12.48□□□□□ -0.41
Cdh17Q9R100 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.48□□□□□ -0.41
Cdh17Q9R100 Gm10156-201ENSMUST00000122364 462 ntBASIC12.48□□□□□ -0.41
Cdh17Q9R100 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Cdh17Q9R100 Gm18018-201ENSMUST00000198273 408 ntBASIC12.48□□□□□ -0.41
Cdh17Q9R100 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh17Q9R100 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh17Q9R100 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh17Q9R100 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh17Q9R100 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.48□□□□□ -0.41
Cdh17Q9R100 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh17Q9R100 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Cdh17Q9R100 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh17Q9R100 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Cdh17Q9R100 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh17Q9R100 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh17Q9R100 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.48□□□□□ -0.41
Cdh17Q9R100 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.48□□□□□ -0.41
Cdh17Q9R100 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh17Q9R100 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh17Q9R100 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh17Q9R100 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh17Q9R100 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh17Q9R100 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh17Q9R100 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Cdh17Q9R100 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh17Q9R100 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh17Q9R100 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh17Q9R100 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh17Q9R100 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh17Q9R100 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh17Q9R100 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh17Q9R100 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh17Q9R100 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.47□□□□□ -0.41
Cdh17Q9R100 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh17Q9R100 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh17Q9R100 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh17Q9R100 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cdh17Q9R100 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh17Q9R100 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh17Q9R100 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.47□□□□□ -0.41
Cdh17Q9R100 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh17Q9R100 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.47□□□□□ -0.41
Cdh17Q9R100 Gm7287-201ENSMUST00000205267 602 ntBASIC12.47□□□□□ -0.41
Cdh17Q9R100 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cdh17Q9R100 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.47□□□□□ -0.41
Cdh17Q9R100 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh17Q9R100 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh17Q9R100 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh17Q9R100 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Cdh17Q9R100 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh17Q9R100 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh17Q9R100 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Cdh17Q9R100 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cdh17Q9R100 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh17Q9R100 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh17Q9R100 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh17Q9R100 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.47□□□□□ -0.41
Cdh17Q9R100 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh17Q9R100 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh17Q9R100 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh17Q9R100 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.47□□□□□ -0.41
Cdh17Q9R100 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh17Q9R100 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh17Q9R100 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh17Q9R100 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh17Q9R100 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Cdh17Q9R100 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Cdh17Q9R100 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh17Q9R100 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh17Q9R100 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Cdh17Q9R100 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh17Q9R100 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh17Q9R100 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh17Q9R100 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Cdh17Q9R100 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Cdh17Q9R100 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh17Q9R100 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh17Q9R100 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh17Q9R100 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh17Q9R100 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Cdh17Q9R100 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms