Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube3bQ9ES34 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube3bQ9ES34 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube3bQ9ES34 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
Ube3bQ9ES34 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC15.23■□□□□ 0.03
Ube3bQ9ES34 Gm14726-201ENSMUST00000120623 896 ntBASIC15.23■□□□□ 0.03
Ube3bQ9ES34 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC15.23■□□□□ 0.03
Ube3bQ9ES34 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ube3bQ9ES34 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC15.23■□□□□ 0.03
Ube3bQ9ES34 Gm7118-201ENSMUST00000200167 1003 ntBASIC15.23■□□□□ 0.03
Ube3bQ9ES34 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC15.23■□□□□ 0.03
Ube3bQ9ES34 Gm30285-201ENSMUST00000214614 422 ntBASIC15.23■□□□□ 0.03
Ube3bQ9ES34 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube3bQ9ES34 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube3bQ9ES34 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ube3bQ9ES34 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube3bQ9ES34 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ube3bQ9ES34 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ube3bQ9ES34 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.23■□□□□ 0.03
Ube3bQ9ES34 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube3bQ9ES34 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ube3bQ9ES34 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC15.23■□□□□ 0.03
Ube3bQ9ES34 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube3bQ9ES34 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ube3bQ9ES34 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube3bQ9ES34 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ube3bQ9ES34 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube3bQ9ES34 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube3bQ9ES34 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube3bQ9ES34 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube3bQ9ES34 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ube3bQ9ES34 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ube3bQ9ES34 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube3bQ9ES34 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube3bQ9ES34 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube3bQ9ES34 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ube3bQ9ES34 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube3bQ9ES34 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ube3bQ9ES34 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube3bQ9ES34 Gm25214-201ENSMUST00000104573 129 ntBASIC15.22■□□□□ 0.03
Ube3bQ9ES34 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube3bQ9ES34 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube3bQ9ES34 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC15.22■□□□□ 0.03
Ube3bQ9ES34 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC15.22■□□□□ 0.03
Ube3bQ9ES34 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC15.22■□□□□ 0.03
Ube3bQ9ES34 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC15.22■□□□□ 0.03
Ube3bQ9ES34 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ube3bQ9ES34 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC15.22■□□□□ 0.03
Ube3bQ9ES34 AC122371.3-201ENSMUST00000223402 1061 ntBASIC15.22■□□□□ 0.03
Ube3bQ9ES34 AC166095.1-201ENSMUST00000223731 1241 ntBASIC15.22■□□□□ 0.03
Ube3bQ9ES34 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube3bQ9ES34 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Ube3bQ9ES34 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Ube3bQ9ES34 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube3bQ9ES34 Gm42863-201ENSMUST00000197875 2958 ntBASIC15.22■□□□□ 0.03
Ube3bQ9ES34 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ube3bQ9ES34 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube3bQ9ES34 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube3bQ9ES34 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ube3bQ9ES34 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ube3bQ9ES34 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.22■□□□□ 0.03
Ube3bQ9ES34 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube3bQ9ES34 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube3bQ9ES34 Gm42840-201ENSMUST00000200303 2251 ntBASIC15.22■□□□□ 0.03
Ube3bQ9ES34 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Ube3bQ9ES34 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube3bQ9ES34 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube3bQ9ES34 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube3bQ9ES34 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube3bQ9ES34 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube3bQ9ES34 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ube3bQ9ES34 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube3bQ9ES34 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Ube3bQ9ES34 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube3bQ9ES34 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube3bQ9ES34 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube3bQ9ES34 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ube3bQ9ES34 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube3bQ9ES34 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ube3bQ9ES34 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube3bQ9ES34 Gm26956-201ENSMUST00000182176 986 ntBASIC15.21■□□□□ 0.03
Ube3bQ9ES34 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC15.21■□□□□ 0.03
Ube3bQ9ES34 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC15.21■□□□□ 0.03
Ube3bQ9ES34 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube3bQ9ES34 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube3bQ9ES34 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ube3bQ9ES34 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ube3bQ9ES34 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Ube3bQ9ES34 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube3bQ9ES34 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube3bQ9ES34 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ube3bQ9ES34 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ube3bQ9ES34 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC15.21■□□□□ 0.03
Ube3bQ9ES34 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ube3bQ9ES34 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ube3bQ9ES34 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.2■□□□□ 0.02
Ube3bQ9ES34 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ube3bQ9ES34 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ube3bQ9ES34 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Ube3bQ9ES34 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms