Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC17■□□□□ 0.31
Scn4aQ9ER60 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scn4aQ9ER60 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC17■□□□□ 0.31
Scn4aQ9ER60 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Scn4aQ9ER60 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scn4aQ9ER60 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Scn4aQ9ER60 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scn4aQ9ER60 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scn4aQ9ER60 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17■□□□□ 0.31
Scn4aQ9ER60 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
Scn4aQ9ER60 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC17■□□□□ 0.31
Scn4aQ9ER60 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC17■□□□□ 0.31
Scn4aQ9ER60 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scn4aQ9ER60 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scn4aQ9ER60 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scn4aQ9ER60 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scn4aQ9ER60 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scn4aQ9ER60 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC16.99■□□□□ 0.31
Scn4aQ9ER60 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Scn4aQ9ER60 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Scn4aQ9ER60 Gm4900-201ENSMUST00000222046 1628 ntBASIC16.99■□□□□ 0.31
Scn4aQ9ER60 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scn4aQ9ER60 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scn4aQ9ER60 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC16.99■□□□□ 0.31
Scn4aQ9ER60 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scn4aQ9ER60 Gm15982-201ENSMUST00000121681 554 ntBASIC16.99■□□□□ 0.31
Scn4aQ9ER60 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Scn4aQ9ER60 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scn4aQ9ER60 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Scn4aQ9ER60 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scn4aQ9ER60 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Scn4aQ9ER60 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Scn4aQ9ER60 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Scn4aQ9ER60 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Scn4aQ9ER60 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC16.99■□□□□ 0.31
Scn4aQ9ER60 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scn4aQ9ER60 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Scn4aQ9ER60 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scn4aQ9ER60 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Scn4aQ9ER60 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scn4aQ9ER60 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC16.98■□□□□ 0.31
Scn4aQ9ER60 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
Scn4aQ9ER60 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC16.98■□□□□ 0.31
Scn4aQ9ER60 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Scn4aQ9ER60 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scn4aQ9ER60 Gm23105-201ENSMUST00000083719 134 ntBASIC16.98■□□□□ 0.31
Scn4aQ9ER60 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scn4aQ9ER60 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scn4aQ9ER60 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scn4aQ9ER60 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scn4aQ9ER60 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Scn4aQ9ER60 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC16.98■□□□□ 0.31
Scn4aQ9ER60 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scn4aQ9ER60 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scn4aQ9ER60 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scn4aQ9ER60 Gm5989-201ENSMUST00000096092 2077 ntBASIC16.98■□□□□ 0.31
Scn4aQ9ER60 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scn4aQ9ER60 Gm13171-201ENSMUST00000117233 391 ntBASIC16.98■□□□□ 0.31
Scn4aQ9ER60 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC16.98■□□□□ 0.31
Scn4aQ9ER60 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC16.98■□□□□ 0.31
Scn4aQ9ER60 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC16.98■□□□□ 0.31
Scn4aQ9ER60 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Scn4aQ9ER60 Gm25677-201ENSMUST00000174983 72 ntBASIC16.98■□□□□ 0.31
Scn4aQ9ER60 Gm6606-201ENSMUST00000193613 947 ntBASIC16.98■□□□□ 0.31
Scn4aQ9ER60 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scn4aQ9ER60 AC122346.3-201ENSMUST00000223983 306 ntBASIC16.98■□□□□ 0.31
Scn4aQ9ER60 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Scn4aQ9ER60 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Scn4aQ9ER60 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scn4aQ9ER60 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scn4aQ9ER60 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
Scn4aQ9ER60 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scn4aQ9ER60 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Scn4aQ9ER60 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Scn4aQ9ER60 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scn4aQ9ER60 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC16.97■□□□□ 0.31
Scn4aQ9ER60 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Scn4aQ9ER60 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scn4aQ9ER60 Gm14270-201ENSMUST00000118388 846 ntBASIC16.97■□□□□ 0.31
Scn4aQ9ER60 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Scn4aQ9ER60 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC16.97■□□□□ 0.31
Scn4aQ9ER60 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Scn4aQ9ER60 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC16.97■□□□□ 0.31
Scn4aQ9ER60 AC162932.1-201ENSMUST00000219209 872 ntBASIC16.97■□□□□ 0.31
Scn4aQ9ER60 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
Scn4aQ9ER60 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scn4aQ9ER60 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC16.97■□□□□ 0.31
Scn4aQ9ER60 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scn4aQ9ER60 Olfr584-201ENSMUST00000098210 964 ntBASIC16.97■□□□□ 0.31
Scn4aQ9ER60 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scn4aQ9ER60 Gm8899-201ENSMUST00000214635 1332 ntBASIC16.97■□□□□ 0.31
Scn4aQ9ER60 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scn4aQ9ER60 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Scn4aQ9ER60 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scn4aQ9ER60 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Scn4aQ9ER60 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Scn4aQ9ER60 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Scn4aQ9ER60 Gm8798-201ENSMUST00000211877 1661 ntBASIC16.96■□□□□ 0.31
Scn4aQ9ER60 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scn4aQ9ER60 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms