Protein–RNA interactions for Protein: Q9EPL6

Mmp1b, Interstitial collagenase B, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1bQ9EPL6 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Gm22189-201ENSMUST00000103822 86 ntBASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Gm5279-201ENSMUST00000199575 745 ntBASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Gm19220-201ENSMUST00000222682 803 ntBASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Daam2-202ENSMUST00000224595 1926 ntBASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Mmp1bQ9EPL6 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 Gm5354-201ENSMUST00000182417 973 ntBASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 Gm42612-201ENSMUST00000197986 623 ntBASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 Gm43170-201ENSMUST00000199827 612 ntBASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 Gm6218-201ENSMUST00000219812 628 ntBASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Mmp1bQ9EPL6 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Mmp1bQ9EPL6 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Mmp1bQ9EPL6 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Mmp1bQ9EPL6 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Mmp1bQ9EPL6 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Mmp1bQ9EPL6 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Mmp1bQ9EPL6 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Mmp1bQ9EPL6 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Mmp1bQ9EPL6 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Mmp1bQ9EPL6 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Mmp1bQ9EPL6 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Mmp1bQ9EPL6 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Mmp1bQ9EPL6 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Mmp1bQ9EPL6 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Mmp1bQ9EPL6 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Mmp1bQ9EPL6 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Mmp1bQ9EPL6 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Mmp1bQ9EPL6 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Mmp1bQ9EPL6 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Mmp1bQ9EPL6 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Mmp1bQ9EPL6 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Mmp1bQ9EPL6 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Mmp1bQ9EPL6 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Mmp1bQ9EPL6 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Mmp1bQ9EPL6 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.28□□□□□ -0.6
Mmp1bQ9EPL6 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Mmp1bQ9EPL6 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Mmp1bQ9EPL6 Gm7488-201ENSMUST00000117148 684 ntBASIC11.28□□□□□ -0.6
Mmp1bQ9EPL6 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.28□□□□□ -0.6
Mmp1bQ9EPL6 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Mmp1bQ9EPL6 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Mmp1bQ9EPL6 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms