Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.05□□□□□ -0.48
Hmgn3Q9DCB1 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Gm2756-201ENSMUST00000195851 400 ntBASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Gm42599-201ENSMUST00000201308 469 ntBASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Chchd1-203ENSMUST00000224633 557 ntBASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
Hmgn3Q9DCB1 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgn3Q9DCB1 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgn3Q9DCB1 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgn3Q9DCB1 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgn3Q9DCB1 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgn3Q9DCB1 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgn3Q9DCB1 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgn3Q9DCB1 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgn3Q9DCB1 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgn3Q9DCB1 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.03□□□□□ -0.48
Hmgn3Q9DCB1 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgn3Q9DCB1 Gm15393-201ENSMUST00000120499 219 ntBASIC12.03□□□□□ -0.48
Hmgn3Q9DCB1 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgn3Q9DCB1 Gm10253-201ENSMUST00000194270 940 ntBASIC12.03□□□□□ -0.48
Hmgn3Q9DCB1 Gm2213-201ENSMUST00000197485 688 ntBASIC12.03□□□□□ -0.48
Hmgn3Q9DCB1 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgn3Q9DCB1 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.03□□□□□ -0.48
Hmgn3Q9DCB1 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgn3Q9DCB1 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgn3Q9DCB1 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgn3Q9DCB1 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgn3Q9DCB1 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgn3Q9DCB1 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgn3Q9DCB1 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Hmgn3Q9DCB1 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.03□□□□□ -0.48
Hmgn3Q9DCB1 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.03□□□□□ -0.48
Hmgn3Q9DCB1 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgn3Q9DCB1 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.03□□□□□ -0.48
Hmgn3Q9DCB1 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.03□□□□□ -0.48
Hmgn3Q9DCB1 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.03□□□□□ -0.48
Hmgn3Q9DCB1 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgn3Q9DCB1 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.03□□□□□ -0.48
Hmgn3Q9DCB1 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hmgn3Q9DCB1 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Hmgn3Q9DCB1 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.02□□□□□ -0.48
Hmgn3Q9DCB1 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Hmgn3Q9DCB1 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn3Q9DCB1 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn3Q9DCB1 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn3Q9DCB1 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn3Q9DCB1 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.02□□□□□ -0.49
Hmgn3Q9DCB1 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.02□□□□□ -0.49
Hmgn3Q9DCB1 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.02□□□□□ -0.49
Hmgn3Q9DCB1 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn3Q9DCB1 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.02□□□□□ -0.49
Hmgn3Q9DCB1 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.02□□□□□ -0.49
Hmgn3Q9DCB1 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn3Q9DCB1 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn3Q9DCB1 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.02□□□□□ -0.49
Hmgn3Q9DCB1 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.02□□□□□ -0.49
Hmgn3Q9DCB1 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn3Q9DCB1 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.02□□□□□ -0.49
Hmgn3Q9DCB1 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.02□□□□□ -0.49
Hmgn3Q9DCB1 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hmgn3Q9DCB1 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms