Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.4□□□□□ -0.26
Chmp2aQ9DB34 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Chmp2aQ9DB34 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Chmp2aQ9DB34 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Chmp2aQ9DB34 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2aQ9DB34 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.39□□□□□ -0.27
Chmp2aQ9DB34 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2aQ9DB34 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2aQ9DB34 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2aQ9DB34 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.39□□□□□ -0.27
Chmp2aQ9DB34 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2aQ9DB34 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Chmp2aQ9DB34 Gm12384-201ENSMUST00000119228 919 ntBASIC13.39□□□□□ -0.27
Chmp2aQ9DB34 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2aQ9DB34 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2aQ9DB34 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2aQ9DB34 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.39□□□□□ -0.27
Chmp2aQ9DB34 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Chmp2aQ9DB34 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.39□□□□□ -0.27
Chmp2aQ9DB34 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.39□□□□□ -0.27
Chmp2aQ9DB34 Gm19163-201ENSMUST00000223313 780 ntBASIC13.39□□□□□ -0.27
Chmp2aQ9DB34 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2aQ9DB34 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2aQ9DB34 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Chmp2aQ9DB34 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.39□□□□□ -0.27
Chmp2aQ9DB34 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2aQ9DB34 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2aQ9DB34 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2aQ9DB34 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2aQ9DB34 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2aQ9DB34 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2aQ9DB34 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Chmp2aQ9DB34 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2aQ9DB34 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2aQ9DB34 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2aQ9DB34 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.39□□□□□ -0.27
Chmp2aQ9DB34 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2aQ9DB34 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Chmp2aQ9DB34 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.38□□□□□ -0.27
Chmp2aQ9DB34 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2aQ9DB34 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2aQ9DB34 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2aQ9DB34 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.38□□□□□ -0.27
Chmp2aQ9DB34 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2aQ9DB34 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2aQ9DB34 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2aQ9DB34 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2aQ9DB34 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Chmp2aQ9DB34 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.38□□□□□ -0.27
Chmp2aQ9DB34 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.38□□□□□ -0.27
Chmp2aQ9DB34 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2aQ9DB34 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2aQ9DB34 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2aQ9DB34 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.38□□□□□ -0.27
Chmp2aQ9DB34 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.38□□□□□ -0.27
Chmp2aQ9DB34 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Chmp2aQ9DB34 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.38□□□□□ -0.27
Chmp2aQ9DB34 Gm12363-201ENSMUST00000122250 668 ntBASIC13.38□□□□□ -0.27
Chmp2aQ9DB34 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2aQ9DB34 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2aQ9DB34 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.38□□□□□ -0.27
Chmp2aQ9DB34 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Chmp2aQ9DB34 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2aQ9DB34 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2aQ9DB34 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2aQ9DB34 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.38□□□□□ -0.27
Chmp2aQ9DB34 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2aQ9DB34 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2aQ9DB34 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2aQ9DB34 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.38□□□□□ -0.27
Chmp2aQ9DB34 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2aQ9DB34 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2aQ9DB34 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Chmp2aQ9DB34 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Chmp2aQ9DB34 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chmp2aQ9DB34 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp2aQ9DB34 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.37□□□□□ -0.27
Chmp2aQ9DB34 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp2aQ9DB34 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp2aQ9DB34 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp2aQ9DB34 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp2aQ9DB34 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp2aQ9DB34 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp2aQ9DB34 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp2aQ9DB34 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp2aQ9DB34 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chmp2aQ9DB34 Gm14704-201ENSMUST00000120300 874 ntBASIC13.37□□□□□ -0.27
Chmp2aQ9DB34 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.37□□□□□ -0.27
Chmp2aQ9DB34 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms