Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap53Q9D439 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap53Q9D439 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap53Q9D439 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap53Q9D439 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cfap53Q9D439 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap53Q9D439 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap53Q9D439 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap53Q9D439 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cfap53Q9D439 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.1□□□□□ -0.15
Cfap53Q9D439 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap53Q9D439 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap53Q9D439 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cfap53Q9D439 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap53Q9D439 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap53Q9D439 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap53Q9D439 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap53Q9D439 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap53Q9D439 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap53Q9D439 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cfap53Q9D439 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap53Q9D439 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap53Q9D439 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.09□□□□□ -0.15
Cfap53Q9D439 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap53Q9D439 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap53Q9D439 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.09□□□□□ -0.15
Cfap53Q9D439 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap53Q9D439 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Cfap53Q9D439 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.09□□□□□ -0.15
Cfap53Q9D439 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap53Q9D439 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap53Q9D439 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap53Q9D439 Gm8805-201ENSMUST00000117848 313 ntBASIC14.09□□□□□ -0.15
Cfap53Q9D439 Gm13369-201ENSMUST00000119442 987 ntBASIC14.09□□□□□ -0.15
Cfap53Q9D439 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.09□□□□□ -0.15
Cfap53Q9D439 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap53Q9D439 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.09□□□□□ -0.15
Cfap53Q9D439 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap53Q9D439 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.09□□□□□ -0.15
Cfap53Q9D439 Gm22331-201ENSMUST00000158066 136 ntBASIC14.09□□□□□ -0.15
Cfap53Q9D439 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.09□□□□□ -0.15
Cfap53Q9D439 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.09□□□□□ -0.15
Cfap53Q9D439 Gm37497-201ENSMUST00000195830 798 ntBASIC14.09□□□□□ -0.15
Cfap53Q9D439 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.09□□□□□ -0.15
Cfap53Q9D439 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cfap53Q9D439 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap53Q9D439 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.09□□□□□ -0.15
Cfap53Q9D439 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.09□□□□□ -0.15
Cfap53Q9D439 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.09□□□□□ -0.15
Cfap53Q9D439 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap53Q9D439 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap53Q9D439 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap53Q9D439 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap53Q9D439 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap53Q9D439 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap53Q9D439 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cfap53Q9D439 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap53Q9D439 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.09□□□□□ -0.15
Cfap53Q9D439 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.08□□□□□ -0.15
Cfap53Q9D439 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.08□□□□□ -0.15
Cfap53Q9D439 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Cfap53Q9D439 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cfap53Q9D439 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cfap53Q9D439 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.08□□□□□ -0.16
Cfap53Q9D439 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cfap53Q9D439 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cfap53Q9D439 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cfap53Q9D439 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cfap53Q9D439 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cfap53Q9D439 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cfap53Q9D439 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cfap53Q9D439 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cfap53Q9D439 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
Cfap53Q9D439 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Cfap53Q9D439 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Cfap53Q9D439 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Cfap53Q9D439 Gm2231-201ENSMUST00000125661 612 ntBASIC14.08□□□□□ -0.16
Cfap53Q9D439 Gm24644-201ENSMUST00000157114 139 ntBASIC14.08□□□□□ -0.16
Cfap53Q9D439 Gm26185-201ENSMUST00000157692 266 ntBASIC14.08□□□□□ -0.16
Cfap53Q9D439 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cfap53Q9D439 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.08□□□□□ -0.16
Cfap53Q9D439 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cfap53Q9D439 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
Cfap53Q9D439 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.08□□□□□ -0.16
Cfap53Q9D439 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cfap53Q9D439 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cfap53Q9D439 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Cfap53Q9D439 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cfap53Q9D439 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cfap53Q9D439 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cfap53Q9D439 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cfap53Q9D439 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.08□□□□□ -0.16
Cfap53Q9D439 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cfap53Q9D439 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cfap53Q9D439 Gm14608-201ENSMUST00000120030 1553 ntBASIC14.08□□□□□ -0.16
Cfap53Q9D439 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cfap53Q9D439 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cfap53Q9D439 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Cfap53Q9D439 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cfap53Q9D439 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms