Protein–RNA interactions for Protein: Q9D3S3

Snx29, Sorting nexin-29, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx29Q9D3S3 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Snx29Q9D3S3 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Snx29Q9D3S3 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Snx29Q9D3S3 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Snx29Q9D3S3 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Snx29Q9D3S3 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Snx29Q9D3S3 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.03□□□□□ -0.16
Snx29Q9D3S3 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC14.03□□□□□ -0.16
Snx29Q9D3S3 Gm14644-201ENSMUST00000116671 647 ntBASIC14.03□□□□□ -0.16
Snx29Q9D3S3 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.03□□□□□ -0.16
Snx29Q9D3S3 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Snx29Q9D3S3 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC14.03□□□□□ -0.16
Snx29Q9D3S3 Gm24749-201ENSMUST00000157838 343 ntBASIC14.03□□□□□ -0.16
Snx29Q9D3S3 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Snx29Q9D3S3 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Snx29Q9D3S3 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.03□□□□□ -0.16
Snx29Q9D3S3 Gm17812-201ENSMUST00000204935 318 ntBASIC14.03□□□□□ -0.16
Snx29Q9D3S3 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Snx29Q9D3S3 AC107638.1-201ENSMUST00000213690 1061 ntBASIC14.03□□□□□ -0.16
Snx29Q9D3S3 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.03□□□□□ -0.16
Snx29Q9D3S3 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Snx29Q9D3S3 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Snx29Q9D3S3 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Snx29Q9D3S3 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Snx29Q9D3S3 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Snx29Q9D3S3 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Snx29Q9D3S3 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Snx29Q9D3S3 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Snx29Q9D3S3 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Snx29Q9D3S3 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Snx29Q9D3S3 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Snx29Q9D3S3 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Snx29Q9D3S3 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Snx29Q9D3S3 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Snx29Q9D3S3 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Snx29Q9D3S3 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Snx29Q9D3S3 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Snx29Q9D3S3 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.02□□□□□ -0.16
Snx29Q9D3S3 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Snx29Q9D3S3 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Snx29Q9D3S3 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Snx29Q9D3S3 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Snx29Q9D3S3 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC14.02□□□□□ -0.16
Snx29Q9D3S3 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Snx29Q9D3S3 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Snx29Q9D3S3 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Snx29Q9D3S3 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC14.02□□□□□ -0.16
Snx29Q9D3S3 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Snx29Q9D3S3 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Snx29Q9D3S3 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Snx29Q9D3S3 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Snx29Q9D3S3 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Snx29Q9D3S3 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Snx29Q9D3S3 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Snx29Q9D3S3 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Snx29Q9D3S3 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.02□□□□□ -0.17
Snx29Q9D3S3 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.02□□□□□ -0.17
Snx29Q9D3S3 Gm12266-201ENSMUST00000120311 962 ntBASIC14.02□□□□□ -0.17
Snx29Q9D3S3 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.02□□□□□ -0.17
Snx29Q9D3S3 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Snx29Q9D3S3 Rmrp-201ENSMUST00000157463 271 ntBASIC14.02□□□□□ -0.17
Snx29Q9D3S3 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC14.02□□□□□ -0.17
Snx29Q9D3S3 Gm18730-201ENSMUST00000218038 343 ntBASIC14.02□□□□□ -0.17
Snx29Q9D3S3 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.02□□□□□ -0.17
Snx29Q9D3S3 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.02□□□□□ -0.17
Snx29Q9D3S3 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Snx29Q9D3S3 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Snx29Q9D3S3 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Snx29Q9D3S3 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Snx29Q9D3S3 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Snx29Q9D3S3 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Snx29Q9D3S3 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Snx29Q9D3S3 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Snx29Q9D3S3 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Snx29Q9D3S3 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Snx29Q9D3S3 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Snx29Q9D3S3 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Snx29Q9D3S3 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Snx29Q9D3S3 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.02□□□□□ -0.17
Snx29Q9D3S3 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Snx29Q9D3S3 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Snx29Q9D3S3 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Snx29Q9D3S3 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snx29Q9D3S3 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snx29Q9D3S3 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Snx29Q9D3S3 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snx29Q9D3S3 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Snx29Q9D3S3 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Snx29Q9D3S3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snx29Q9D3S3 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Snx29Q9D3S3 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Snx29Q9D3S3 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snx29Q9D3S3 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snx29Q9D3S3 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snx29Q9D3S3 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snx29Q9D3S3 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snx29Q9D3S3 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Snx29Q9D3S3 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Snx29Q9D3S3 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Snx29Q9D3S3 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms