Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim42Q9D2H5 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim42Q9D2H5 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trim42Q9D2H5 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim42Q9D2H5 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim42Q9D2H5 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.88□□□□□ -0.35
Trim42Q9D2H5 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trim42Q9D2H5 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim42Q9D2H5 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim42Q9D2H5 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.88□□□□□ -0.35
Trim42Q9D2H5 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim42Q9D2H5 Gm6736-201ENSMUST00000166583 948 ntBASIC12.88□□□□□ -0.35
Trim42Q9D2H5 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim42Q9D2H5 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim42Q9D2H5 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trim42Q9D2H5 Gm38144-201ENSMUST00000192790 465 ntBASIC12.88□□□□□ -0.35
Trim42Q9D2H5 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trim42Q9D2H5 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim42Q9D2H5 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trim42Q9D2H5 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim42Q9D2H5 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim42Q9D2H5 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim42Q9D2H5 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim42Q9D2H5 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim42Q9D2H5 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim42Q9D2H5 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim42Q9D2H5 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim42Q9D2H5 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trim42Q9D2H5 Gm5124-202ENSMUST00000132683 2083 ntBASIC12.88□□□□□ -0.35
Trim42Q9D2H5 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim42Q9D2H5 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim42Q9D2H5 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim42Q9D2H5 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.88□□□□□ -0.35
Trim42Q9D2H5 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trim42Q9D2H5 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim42Q9D2H5 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim42Q9D2H5 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim42Q9D2H5 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim42Q9D2H5 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim42Q9D2H5 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Gm12403-201ENSMUST00000121384 959 ntBASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Gm10253-201ENSMUST00000194270 940 ntBASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.87□□□□□ -0.35
Trim42Q9D2H5 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim42Q9D2H5 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim42Q9D2H5 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim42Q9D2H5 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim42Q9D2H5 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim42Q9D2H5 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim42Q9D2H5 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms