Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Snf8Q9CZ28 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Snf8Q9CZ28 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.2□□□□□ -0.3
Snf8Q9CZ28 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snf8Q9CZ28 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snf8Q9CZ28 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snf8Q9CZ28 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snf8Q9CZ28 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snf8Q9CZ28 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Snf8Q9CZ28 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.2□□□□□ -0.3
Snf8Q9CZ28 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.2□□□□□ -0.3
Snf8Q9CZ28 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.2□□□□□ -0.3
Snf8Q9CZ28 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.2□□□□□ -0.3
Snf8Q9CZ28 Gm10576-201ENSMUST00000191927 825 ntBASIC13.2□□□□□ -0.3
Snf8Q9CZ28 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.2□□□□□ -0.3
Snf8Q9CZ28 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.2□□□□□ -0.3
Snf8Q9CZ28 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snf8Q9CZ28 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snf8Q9CZ28 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snf8Q9CZ28 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Snf8Q9CZ28 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snf8Q9CZ28 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snf8Q9CZ28 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
Snf8Q9CZ28 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snf8Q9CZ28 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Snf8Q9CZ28 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snf8Q9CZ28 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Snf8Q9CZ28 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snf8Q9CZ28 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snf8Q9CZ28 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Snf8Q9CZ28 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snf8Q9CZ28 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.2□□□□□ -0.3
Snf8Q9CZ28 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Snf8Q9CZ28 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.2□□□□□ -0.3
Snf8Q9CZ28 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Snf8Q9CZ28 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snf8Q9CZ28 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snf8Q9CZ28 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Snf8Q9CZ28 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snf8Q9CZ28 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snf8Q9CZ28 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snf8Q9CZ28 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snf8Q9CZ28 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snf8Q9CZ28 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snf8Q9CZ28 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snf8Q9CZ28 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Snf8Q9CZ28 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.19□□□□□ -0.3
Snf8Q9CZ28 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snf8Q9CZ28 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snf8Q9CZ28 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Snf8Q9CZ28 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Snf8Q9CZ28 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.19□□□□□ -0.3
Snf8Q9CZ28 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snf8Q9CZ28 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Snf8Q9CZ28 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snf8Q9CZ28 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snf8Q9CZ28 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snf8Q9CZ28 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snf8Q9CZ28 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snf8Q9CZ28 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snf8Q9CZ28 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Snf8Q9CZ28 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snf8Q9CZ28 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.19□□□□□ -0.3
Snf8Q9CZ28 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snf8Q9CZ28 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Snf8Q9CZ28 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Gm44069-201ENSMUST00000204898 506 ntBASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Gm6983-201ENSMUST00000214912 628 ntBASIC13.18□□□□□ -0.3
Snf8Q9CZ28 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Itm2b-204ENSMUST00000228637 783 ntBASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms