Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Khdc3Q9CWU5 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Khdc3Q9CWU5 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Khdc3Q9CWU5 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.32□□□□□ -0.44
Khdc3Q9CWU5 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.32□□□□□ -0.44
Khdc3Q9CWU5 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.32□□□□□ -0.44
Khdc3Q9CWU5 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Khdc3Q9CWU5 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Khdc3Q9CWU5 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Khdc3Q9CWU5 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Khdc3Q9CWU5 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Khdc3Q9CWU5 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Khdc3Q9CWU5 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Khdc3Q9CWU5 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Khdc3Q9CWU5 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Khdc3Q9CWU5 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.32□□□□□ -0.44
Khdc3Q9CWU5 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Khdc3Q9CWU5 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.32□□□□□ -0.44
Khdc3Q9CWU5 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.32□□□□□ -0.44
Khdc3Q9CWU5 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.32□□□□□ -0.44
Khdc3Q9CWU5 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.32□□□□□ -0.44
Khdc3Q9CWU5 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.32□□□□□ -0.44
Khdc3Q9CWU5 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Khdc3Q9CWU5 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Khdc3Q9CWU5 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Khdc3Q9CWU5 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Khdc3Q9CWU5 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Khdc3Q9CWU5 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Khdc3Q9CWU5 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Khdc3Q9CWU5 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Khdc3Q9CWU5 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Khdc3Q9CWU5 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Khdc3Q9CWU5 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Khdc3Q9CWU5 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Khdc3Q9CWU5 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.31□□□□□ -0.44
Khdc3Q9CWU5 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Khdc3Q9CWU5 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Khdc3Q9CWU5 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Khdc3Q9CWU5 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Khdc3Q9CWU5 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Khdc3Q9CWU5 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.31□□□□□ -0.44
Khdc3Q9CWU5 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.31□□□□□ -0.44
Khdc3Q9CWU5 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Khdc3Q9CWU5 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Khdc3Q9CWU5 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Khdc3Q9CWU5 Gm11478-201ENSMUST00000117851 599 ntBASIC12.31□□□□□ -0.44
Khdc3Q9CWU5 Gm13123-201ENSMUST00000122173 492 ntBASIC12.31□□□□□ -0.44
Khdc3Q9CWU5 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.31□□□□□ -0.44
Khdc3Q9CWU5 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Khdc3Q9CWU5 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Khdc3Q9CWU5 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Khdc3Q9CWU5 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.31□□□□□ -0.44
Khdc3Q9CWU5 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Khdc3Q9CWU5 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Khdc3Q9CWU5 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Khdc3Q9CWU5 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Khdc3Q9CWU5 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Khdc3Q9CWU5 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Khdc3Q9CWU5 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Khdc3Q9CWU5 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Khdc3Q9CWU5 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Khdc3Q9CWU5 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Khdc3Q9CWU5 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Khdc3Q9CWU5 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Khdc3Q9CWU5 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
Khdc3Q9CWU5 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Khdc3Q9CWU5 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.31□□□□□ -0.44
Khdc3Q9CWU5 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Gm12203-201ENSMUST00000118235 598 ntBASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Gm13369-201ENSMUST00000119442 987 ntBASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Gm12209-201ENSMUST00000120089 596 ntBASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Gm27839-201ENSMUST00000184242 106 ntBASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Gm27486-201ENSMUST00000184923 80 ntBASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Gm37922-201ENSMUST00000195596 455 ntBASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms