Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim33Q99PP7 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Trim33Q99PP7 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim33Q99PP7 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim33Q99PP7 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim33Q99PP7 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim33Q99PP7 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.79□□□□□ -0.36
Trim33Q99PP7 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim33Q99PP7 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim33Q99PP7 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trim33Q99PP7 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim33Q99PP7 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trim33Q99PP7 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trim33Q99PP7 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trim33Q99PP7 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.79□□□□□ -0.36
Trim33Q99PP7 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim33Q99PP7 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.78□□□□□ -0.36
Trim33Q99PP7 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim33Q99PP7 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Trim33Q99PP7 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trim33Q99PP7 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim33Q99PP7 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim33Q99PP7 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim33Q99PP7 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim33Q99PP7 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.78□□□□□ -0.36
Trim33Q99PP7 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trim33Q99PP7 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trim33Q99PP7 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Trim33Q99PP7 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Trim33Q99PP7 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Trim33Q99PP7 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim33Q99PP7 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim33Q99PP7 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim33Q99PP7 Gm24644-201ENSMUST00000157114 139 ntBASIC12.78□□□□□ -0.36
Trim33Q99PP7 Gm22331-201ENSMUST00000158066 136 ntBASIC12.78□□□□□ -0.36
Trim33Q99PP7 Gm17150-201ENSMUST00000165577 381 ntBASIC12.78□□□□□ -0.36
Trim33Q99PP7 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim33Q99PP7 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim33Q99PP7 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim33Q99PP7 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim33Q99PP7 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.78□□□□□ -0.36
Trim33Q99PP7 Gm19931-201ENSMUST00000198920 368 ntBASIC12.78□□□□□ -0.36
Trim33Q99PP7 Gm43452-201ENSMUST00000201873 991 ntBASIC12.78□□□□□ -0.36
Trim33Q99PP7 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.78□□□□□ -0.36
Trim33Q99PP7 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.78□□□□□ -0.36
Trim33Q99PP7 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim33Q99PP7 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim33Q99PP7 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.78□□□□□ -0.36
Trim33Q99PP7 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim33Q99PP7 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim33Q99PP7 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim33Q99PP7 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim33Q99PP7 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim33Q99PP7 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim33Q99PP7 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim33Q99PP7 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim33Q99PP7 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim33Q99PP7 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Trim33Q99PP7 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim33Q99PP7 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim33Q99PP7 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim33Q99PP7 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim33Q99PP7 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.77□□□□□ -0.36
Trim33Q99PP7 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim33Q99PP7 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim33Q99PP7 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim33Q99PP7 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.77□□□□□ -0.36
Trim33Q99PP7 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.77□□□□□ -0.36
Trim33Q99PP7 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trim33Q99PP7 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim33Q99PP7 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trim33Q99PP7 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.36
Trim33Q99PP7 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim33Q99PP7 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trim33Q99PP7 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim33Q99PP7 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim33Q99PP7 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim33Q99PP7 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim33Q99PP7 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim33Q99PP7 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim33Q99PP7 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.77□□□□□ -0.37
Trim33Q99PP7 Gm13123-201ENSMUST00000122173 492 ntBASIC12.77□□□□□ -0.37
Trim33Q99PP7 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim33Q99PP7 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.77□□□□□ -0.37
Trim33Q99PP7 Gm37922-201ENSMUST00000195596 455 ntBASIC12.77□□□□□ -0.37
Trim33Q99PP7 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.77□□□□□ -0.37
Trim33Q99PP7 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.77□□□□□ -0.37
Trim33Q99PP7 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim33Q99PP7 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim33Q99PP7 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim33Q99PP7 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim33Q99PP7 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim33Q99PP7 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim33Q99PP7 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.77□□□□□ -0.37
Trim33Q99PP7 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.77□□□□□ -0.37
Trim33Q99PP7 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim33Q99PP7 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim33Q99PP7 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim33Q99PP7 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim33Q99PP7 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms