Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim8Q99PJ2 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Trim8Q99PJ2 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim8Q99PJ2 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim8Q99PJ2 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim8Q99PJ2 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim8Q99PJ2 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trim8Q99PJ2 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim8Q99PJ2 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim8Q99PJ2 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim8Q99PJ2 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim8Q99PJ2 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trim8Q99PJ2 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Trim8Q99PJ2 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.59□□□□□ -0.39
Trim8Q99PJ2 Gm27838-201ENSMUST00000184829 128 ntBASIC12.59□□□□□ -0.39
Trim8Q99PJ2 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim8Q99PJ2 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.59□□□□□ -0.39
Trim8Q99PJ2 Gm42550-201ENSMUST00000201553 960 ntBASIC12.59□□□□□ -0.39
Trim8Q99PJ2 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.59□□□□□ -0.39
Trim8Q99PJ2 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim8Q99PJ2 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim8Q99PJ2 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim8Q99PJ2 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim8Q99PJ2 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim8Q99PJ2 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim8Q99PJ2 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim8Q99PJ2 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim8Q99PJ2 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim8Q99PJ2 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim8Q99PJ2 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim8Q99PJ2 AC129336.1-201ENSMUST00000220224 2277 ntBASIC12.59□□□□□ -0.39
Trim8Q99PJ2 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim8Q99PJ2 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim8Q99PJ2 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim8Q99PJ2 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.59□□□□□ -0.39
Trim8Q99PJ2 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Trim8Q99PJ2 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trim8Q99PJ2 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trim8Q99PJ2 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trim8Q99PJ2 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trim8Q99PJ2 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim8Q99PJ2 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim8Q99PJ2 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Trim8Q99PJ2 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Trim8Q99PJ2 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim8Q99PJ2 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim8Q99PJ2 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.58□□□□□ -0.4
Trim8Q99PJ2 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim8Q99PJ2 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim8Q99PJ2 Gm28760-201ENSMUST00000185995 736 ntBASIC12.58□□□□□ -0.4
Trim8Q99PJ2 Gm44855-201ENSMUST00000205725 362 ntBASIC12.58□□□□□ -0.4
Trim8Q99PJ2 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim8Q99PJ2 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim8Q99PJ2 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Trim8Q99PJ2 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trim8Q99PJ2 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim8Q99PJ2 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trim8Q99PJ2 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim8Q99PJ2 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim8Q99PJ2 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trim8Q99PJ2 Syt7-204ENSMUST00000223586 1344 ntBASIC12.58□□□□□ -0.4
Trim8Q99PJ2 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim8Q99PJ2 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim8Q99PJ2 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim8Q99PJ2 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim8Q99PJ2 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim8Q99PJ2 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim8Q99PJ2 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
Trim8Q99PJ2 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trim8Q99PJ2 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim8Q99PJ2 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.57□□□□□ -0.4
Trim8Q99PJ2 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim8Q99PJ2 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim8Q99PJ2 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.57□□□□□ -0.4
Trim8Q99PJ2 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trim8Q99PJ2 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.57□□□□□ -0.4
Trim8Q99PJ2 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
Trim8Q99PJ2 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.57□□□□□ -0.4
Trim8Q99PJ2 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.57□□□□□ -0.4
Trim8Q99PJ2 Gm15321-201ENSMUST00000121290 288 ntBASIC12.57□□□□□ -0.4
Trim8Q99PJ2 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trim8Q99PJ2 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim8Q99PJ2 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.57□□□□□ -0.4
Trim8Q99PJ2 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim8Q99PJ2 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim8Q99PJ2 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trim8Q99PJ2 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim8Q99PJ2 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim8Q99PJ2 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim8Q99PJ2 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim8Q99PJ2 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trim8Q99PJ2 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim8Q99PJ2 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trim8Q99PJ2 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim8Q99PJ2 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim8Q99PJ2 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms