Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh23Q99PF4 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh23Q99PF4 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cdh23Q99PF4 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh23Q99PF4 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh23Q99PF4 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.69□□□□□ -0.38
Cdh23Q99PF4 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh23Q99PF4 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cdh23Q99PF4 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh23Q99PF4 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cdh23Q99PF4 Gm11949-201ENSMUST00000117640 372 ntBASIC12.69□□□□□ -0.38
Cdh23Q99PF4 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh23Q99PF4 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.69□□□□□ -0.38
Cdh23Q99PF4 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cdh23Q99PF4 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh23Q99PF4 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cdh23Q99PF4 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh23Q99PF4 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh23Q99PF4 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh23Q99PF4 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.69□□□□□ -0.38
Cdh23Q99PF4 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cdh23Q99PF4 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh23Q99PF4 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
Cdh23Q99PF4 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh23Q99PF4 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.69□□□□□ -0.38
Cdh23Q99PF4 Gm24891-201ENSMUST00000104391 136 ntBASIC12.69□□□□□ -0.38
Cdh23Q99PF4 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh23Q99PF4 Gm14034-201ENSMUST00000120147 551 ntBASIC12.69□□□□□ -0.38
Cdh23Q99PF4 Gm11836-201ENSMUST00000121022 441 ntBASIC12.69□□□□□ -0.38
Cdh23Q99PF4 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12.69□□□□□ -0.38
Cdh23Q99PF4 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.69□□□□□ -0.38
Cdh23Q99PF4 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh23Q99PF4 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC12.69□□□□□ -0.38
Cdh23Q99PF4 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cdh23Q99PF4 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cdh23Q99PF4 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh23Q99PF4 Gm17213-201ENSMUST00000165161 1360 ntBASIC12.68□□□□□ -0.38
Cdh23Q99PF4 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.68□□□□□ -0.38
Cdh23Q99PF4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh23Q99PF4 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh23Q99PF4 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh23Q99PF4 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.68□□□□□ -0.38
Cdh23Q99PF4 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh23Q99PF4 Gm11509-201ENSMUST00000117358 325 ntBASIC12.68□□□□□ -0.38
Cdh23Q99PF4 Gm13019-201ENSMUST00000120000 276 ntBASIC12.68□□□□□ -0.38
Cdh23Q99PF4 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh23Q99PF4 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh23Q99PF4 Gm20414-201ENSMUST00000172918 646 ntBASIC12.68□□□□□ -0.38
Cdh23Q99PF4 Gm9645-201ENSMUST00000197131 792 ntBASIC12.68□□□□□ -0.38
Cdh23Q99PF4 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh23Q99PF4 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh23Q99PF4 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh23Q99PF4 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh23Q99PF4 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Cdh23Q99PF4 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.68□□□□□ -0.38
Cdh23Q99PF4 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Cdh23Q99PF4 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.68□□□□□ -0.38
Cdh23Q99PF4 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Cdh23Q99PF4 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh23Q99PF4 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.68□□□□□ -0.38
Cdh23Q99PF4 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh23Q99PF4 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh23Q99PF4 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cdh23Q99PF4 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Gm22711-201ENSMUST00000116890 133 ntBASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Gm2875-201ENSMUST00000211333 360 ntBASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Cdh23Q99PF4 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms