Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk9Q99J95 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk9Q99J95 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk9Q99J95 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk9Q99J95 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk9Q99J95 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk9Q99J95 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk9Q99J95 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.94□□□□□ -0.34
Cdk9Q99J95 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cdk9Q99J95 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk9Q99J95 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.93□□□□□ -0.34
Cdk9Q99J95 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.93□□□□□ -0.34
Cdk9Q99J95 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk9Q99J95 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk9Q99J95 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk9Q99J95 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk9Q99J95 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk9Q99J95 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk9Q99J95 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.93□□□□□ -0.34
Cdk9Q99J95 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk9Q99J95 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.93□□□□□ -0.34
Cdk9Q99J95 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.93□□□□□ -0.34
Cdk9Q99J95 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk9Q99J95 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk9Q99J95 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.93□□□□□ -0.34
Cdk9Q99J95 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk9Q99J95 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.93□□□□□ -0.34
Cdk9Q99J95 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.93□□□□□ -0.34
Cdk9Q99J95 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.93□□□□□ -0.34
Cdk9Q99J95 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.93□□□□□ -0.34
Cdk9Q99J95 Gm12403-201ENSMUST00000121384 959 ntBASIC12.93□□□□□ -0.34
Cdk9Q99J95 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.93□□□□□ -0.34
Cdk9Q99J95 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk9Q99J95 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.93□□□□□ -0.34
Cdk9Q99J95 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.93□□□□□ -0.34
Cdk9Q99J95 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.93□□□□□ -0.34
Cdk9Q99J95 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.93□□□□□ -0.34
Cdk9Q99J95 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk9Q99J95 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.93□□□□□ -0.34
Cdk9Q99J95 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.93□□□□□ -0.34
Cdk9Q99J95 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Cdk9Q99J95 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.93□□□□□ -0.34
Cdk9Q99J95 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk9Q99J95 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.93□□□□□ -0.34
Cdk9Q99J95 Gm9063-201ENSMUST00000223299 582 ntBASIC12.93□□□□□ -0.34
Cdk9Q99J95 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk9Q99J95 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk9Q99J95 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk9Q99J95 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.93□□□□□ -0.34
Cdk9Q99J95 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Cdk9Q99J95 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.93□□□□□ -0.34
Cdk9Q99J95 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk9Q99J95 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.93□□□□□ -0.34
Cdk9Q99J95 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk9Q99J95 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Cdk9Q99J95 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk9Q99J95 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk9Q99J95 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk9Q99J95 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk9Q99J95 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk9Q99J95 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk9Q99J95 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Cdk9Q99J95 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Cdk9Q99J95 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.93□□□□□ -0.34
Cdk9Q99J95 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdk9Q99J95 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk9Q99J95 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk9Q99J95 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk9Q99J95 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk9Q99J95 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Cdk9Q99J95 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.92□□□□□ -0.34
Cdk9Q99J95 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.92□□□□□ -0.34
Cdk9Q99J95 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Cdk9Q99J95 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Cdk9Q99J95 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk9Q99J95 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.92□□□□□ -0.34
Cdk9Q99J95 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk9Q99J95 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk9Q99J95 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.92□□□□□ -0.34
Cdk9Q99J95 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.92□□□□□ -0.34
Cdk9Q99J95 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.92□□□□□ -0.34
Cdk9Q99J95 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cdk9Q99J95 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.92□□□□□ -0.34
Cdk9Q99J95 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.92□□□□□ -0.34
Cdk9Q99J95 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Cdk9Q99J95 Mir7684-201ENSMUST00000183858 60 ntBASIC12.92□□□□□ -0.34
Cdk9Q99J95 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.92□□□□□ -0.34
Cdk9Q99J95 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Cdk9Q99J95 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.92□□□□□ -0.34
Cdk9Q99J95 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk9Q99J95 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cdk9Q99J95 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cdk9Q99J95 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.92□□□□□ -0.34
Cdk9Q99J95 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk9Q99J95 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk9Q99J95 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk9Q99J95 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk9Q99J95 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk9Q99J95 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdk9Q99J95 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms